public void testParse_ncbiFormat() throws MalformedURLException,
IOException
{
- assertNull(ScoreModels.getInstance().forName("MyNewTest"));
+ assertNull(ScoreModels.getInstance().getScoreModel("MyNewTest", null));
String data = "ScoreMatrix MyNewTest\n" + "\tA\tB\tC\n"
+ "A\t1.0\t2.0\t3.0\n" + "B\t4.0\t5.0\t6.0\n"
parser.parse();
- ScoreMatrix sm = (ScoreMatrix) ScoreModels.getInstance().forName(
- "MyNewTest");
+ ScoreMatrix sm = (ScoreMatrix) ScoreModels.getInstance().getScoreModel(
+ "MyNewTest", null);
assertNotNull(sm);
assertEquals(sm.getName(), "MyNewTest");
assertEquals(parser.getMatrixName(), "MyNewTest");