|| (seq_original[i].getSequenceFeatures() != null && seq_new[in]
.getSequenceFeatures() != null));
// compare sequence features
- if (seq_original[i].getSequenceFeatures() != null
+ if (!ignoreFeatures
+ && seq_original[i].getSequenceFeatures() != null
&& seq_new[in].getSequenceFeatures() != null)
{
- System.out.println("There are feature!!!");
+ System.out.println("Checking feature equivalence.");
sequenceFeatures_original = seq_original[i]
.getSequenceFeatures();
sequenceFeatures_new = seq_new[in].getSequenceFeatures();