/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1)
+ * Copyright (C) 2015 The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.schemes;
import java.util.Map;
-import org.junit.Test;
+import org.testng.annotations.Test;
-
-public class ScoreMatrixPrinter
+public class ScoreMatrixPrinter
{
- @Test
+ @Test(groups = { "Functional" })
public void printAllMatrices()
{
- for (Map.Entry<String,ScoreModelI> sm: ResidueProperties.scoreMatrices.entrySet())
+ for (Map.Entry<String, ScoreModelI> sm : ResidueProperties.scoreMatrices
+ .entrySet())
{
- System.out.println("Matrix "+sm.getKey());
+ System.out.println("Matrix " + sm.getKey());
System.out.println(sm.getValue().toString());
}
}
- @Test
+
+ @Test(groups = { "Functional" })
public void printHTMLMatrices()
{
- for (Map.Entry<String,ScoreModelI> _sm: ResidueProperties.scoreMatrices.entrySet())
+ for (Map.Entry<String, ScoreModelI> _sm : ResidueProperties.scoreMatrices
+ .entrySet())
{
if (_sm.getValue() instanceof ScoreMatrix)
{
ScoreMatrix sm = (ScoreMatrix) _sm.getValue();
- System.out.println("Matrix "+_sm.getKey());
+ System.out.println("Matrix " + _sm.getKey());
System.out.println(sm.outputMatrix(true));
}
}