sm.setAddTempFacAnnot(true);
StructureFile pmap = sm.setMapping(true, new SequenceI[] { seq },
new String[]
- { null }, "examples/1gaq.txt", DataSourceType.FILE);
+ { null }, "examples/1gaq.txt", DataSourceType.FILE, null, null);
assertTrue(pmap != null);
assertEquals(3, pmap.getSeqs().size());
sm.setAddTempFacAnnot(true);
StructureFile pmap = sm.setMapping(true, new SequenceI[] { seq },
new String[]
- { null }, P4IM2_MISSING, DataSourceType.FILE);
+ { null }, P4IM2_MISSING, DataSourceType.FILE, null, null);
assertTrue(pmap != null);
assertEquals(1, pmap.getSeqs().size());