Merge hack/JAL-1617 fake DBRef to develop

[jalview.git] / test / jalview / ws / PDBSequenceFetcherTest.java

diff --git a/test/jalview/ws/PDBSequenceFetcherTest.java b/test/jalview/ws/PDBSequenceFetcherTest.java
index fc23faa..0868ded 100644 (file)
--- a/test/jalview/ws/PDBSequenceFetcherTest.java
+++ b/test/jalview/ws/PDBSequenceFetcherTest.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -34,6 +34,7 @@ public class PDBSequenceFetcherTest
 {
 
   SequenceFetcher sf;
+
   @Before
   public void setUp() throws Exception
   {
@@ -41,27 +42,18 @@ public class PDBSequenceFetcherTest
   }
 
   @Test
-  public void testPdbPerChainRetrieve() throws Exception
-  {
-    List<DbSourceProxy> sps = sf
-    .getSourceProxy("PDB");
-    AlignmentI response = sps.get(0).getSequenceRecords("1QIPA");
-    assertTrue(response!=null);
-    assertTrue(response.getHeight()==1);
-  }
-  @Test
   public void testRnaSeqRetrieve() throws Exception
   {
-    List<DbSourceProxy> sps = sf
-    .getSourceProxy("PDB");
+    List<DbSourceProxy> sps = sf.getSourceProxy("PDB");
     AlignmentI response = sps.get(0).getSequenceRecords("2GIS");
-    assertTrue(response!=null);
-    assertTrue(response.getHeight()==1);
-    for (SequenceI sq:response.getSequences())
+    assertTrue(response != null);
+    assertTrue(response.getHeight() == 1);
+    for (SequenceI sq : response.getSequences())
     {
-      assertTrue("No annotation transfered to sequence.",sq.getAnnotation().length>0);
-      assertTrue("No PDBEntry on sequence.",sq.getPDBId().size()>0);
-      assertTrue("No RNA annotation on sequence.", sq.getRNA()!=null);
+      assertTrue("No annotation transfered to sequence.",
+              sq.getAnnotation().length > 0);
+      assertTrue("No PDBEntry on sequence.", sq.getPDBId().size() > 0);
+      assertTrue("No RNA annotation on sequence.", sq.getRNA() != null);
     }
   }