JAL-1925 update source version in license

[jalview.git] / test / jalview / ws / dbsources / PDBRestClientTest.java

diff --git a/test/jalview/ws/dbsources/PDBRestClientTest.java b/test/jalview/ws/dbsources/PDBRestClientTest.java
index a97f3e0..f3cd9ef 100644 (file)
--- a/test/jalview/ws/dbsources/PDBRestClientTest.java
+++ b/test/jalview/ws/dbsources/PDBRestClientTest.java
@@ -1,8 +1,28 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
+ * Copyright (C) 2015 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.ws.dbsources;
 
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertTrue;
-import static org.junit.Assert.fail;
+import static org.testng.AssertJUnit.assertEquals;
+import static org.testng.AssertJUnit.assertTrue;
+
 import jalview.ws.dbsources.PDBRestClient.PDBDocField;
 import jalview.ws.uimodel.PDBRestRequest;
 import jalview.ws.uimodel.PDBRestResponse;
@@ -20,9 +40,10 @@ import org.json.simple.JSONArray;
 import org.json.simple.JSONObject;
 import org.json.simple.parser.JSONParser;
 import org.json.simple.parser.ParseException;
-import org.junit.After;
-import org.junit.Before;
-import org.junit.Test;
+import org.testng.Assert;
+import org.testng.annotations.AfterMethod;
+import org.testng.annotations.BeforeMethod;
+import org.testng.annotations.Test;
 
 import com.sun.jersey.api.client.Client;
 import com.sun.jersey.api.client.ClientResponse;
@@ -33,17 +54,17 @@ import com.sun.jersey.api.client.config.DefaultClientConfig;
 public class PDBRestClientTest
 {
 
-  @Before
+  @BeforeMethod(alwaysRun = true)
   public void setUp() throws Exception
   {
   }
 
-  @After
+  @AfterMethod
   public void tearDown() throws Exception
   {
   }
 
-  @Test
+  @Test(groups = { "External", "Network" })
   public void executeRequestTest()
   {
     List<PDBDocField> wantedFields = new ArrayList<PDBDocField>();
@@ -67,7 +88,7 @@ public class PDBRestClientTest
     } catch (Exception e)
     {
       e.printStackTrace();
-      fail("Couldn't execute webservice call!");
+      Assert.fail("Couldn't execute webservice call!");
       return;
     }
     assertTrue(response.getNumberOfItemsFound() > 99);
@@ -75,7 +96,7 @@ public class PDBRestClientTest
     assertTrue(response.getSearchSummary().size() > 99);
   }
 
-  @Test
+  @Test(groups = { "Functional" })
   public void getPDBDocFieldsAsCommaDelimitedStringTest()
   {
     List<PDBDocField> wantedFields = new ArrayList<PDBDocField>();
@@ -92,7 +113,7 @@ public class PDBRestClientTest
     assertEquals("", expectedResult, actualResult);
   }
 
-  @Test
+  @Test(groups = { "External, Network" })
   public void parsePDBJsonExceptionStringTest()
   {
     List<PDBDocField> wantedFields = new ArrayList<PDBDocField>();
@@ -130,7 +151,9 @@ public class PDBRestClientTest
     assertEquals(expectedErrorMsg, parsedErrorResponse);
   }
 
-  @Test(expected = Exception.class)
+  @Test(
+    groups = { "External", "Network" },
+    expectedExceptions = Exception.class)
   public void testForExpectedRuntimeException() throws Exception
   {
     List<PDBDocField> wantedFields = new ArrayList<PDBDocField>();
@@ -143,7 +166,7 @@ public class PDBRestClientTest
     new PDBRestClient().executeRequest(request);
   }
 
-  @Test
+  @Test(groups = { "External" })
   public void parsePDBJsonResponseTest()
   {
     List<PDBDocField> wantedFields = new ArrayList<PDBDocField>();
@@ -172,7 +195,7 @@ public class PDBRestClientTest
     assertTrue(response.getSearchSummary().size() == 14);
   }
 
-  @Test
+  @Test(groups = { "Functional" })
   public void getPDBIdColumIndexTest()
   {
     List<PDBDocField> wantedFields = new ArrayList<PDBDocField>();
@@ -185,7 +208,7 @@ public class PDBRestClientTest
     assertEquals(4, PDBRestClient.getPDBIdColumIndex(wantedFields, false));
   }
 
-  @Test
+  @Test(groups = { "External" })
   public void externalServiceIntegrationTest()
   {
     ClientConfig clientConfig = new DefaultClientConfig();
@@ -207,7 +230,7 @@ public class PDBRestClientTest
     // Check the response status and report exception if one occurs
     if (clientResponse.getStatus() != 200)
     {
-      fail("Webservice call failed!!!");
+      Assert.fail("Webservice call failed!!!");
     }
     else
     {
@@ -241,14 +264,14 @@ public class PDBRestClientTest
           if (pdbJsonDoc.get(field.getCode()) == null)
           {
             // System.out.println(">>>\t" + field.getCode());
-            assertTrue(field.getClass()
+            assertTrue(field.getCode()
                     + " has been removed from PDB doc Entity",
                     !pdbJsonResponseString.contains(field.getCode()));
           }
         }
       } catch (ParseException e)
       {
-        fail(">>>  Test failed due to exception while parsing pdb response json !!!");
+        Assert.fail(">>>  Test failed due to exception while parsing pdb response json !!!");
         e.printStackTrace();
       }
     }
@@ -268,7 +291,7 @@ public class PDBRestClientTest
         sb.append(line);
         sb.append(System.lineSeparator());
         line = br.readLine();
-        }
+      }
       fileContent = sb.toString();
     } finally
     {