git://source.jalview.org / jalview.git / blobdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | inline | side by side
JAL-3111 sign the uninstaller script .. again
[jalview.git] / utils / install4j / file_associations_auto-install4j.xml
diff --git a/utils/install4j/file_associations_auto-install4j.xml b/utils/install4j/file_associations_auto-install4j.xml
index d82eff3..192b5d2 100644 (file)
--- a/utils/install4j/file_associations_auto-install4j.xml
+++ b/utils/install4j/file_associations_auto-install4j.xml
@@ -1,19 +1,19 @@
-              <action name="" id="10000" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .fa file association">
+              <action name="" id="10000" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .jvp file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Fasta File</string>
+                        <string>Jalview File</string>
                       </void>
                       <void property="extension">
-                        <string>fa</string>
+                        <string>jvp</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -24,7 +24,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -33,22 +33,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10001" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .fasta file association">
+              <action name="" id="10001" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .jvl file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Fasta File</string>
+                        <string>Jalview Version Locator File</string>
                       </void>
                       <void property="extension">
-                        <string>fasta</string>
+                        <string>jvl</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-Version-Locator.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -59,7 +59,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-Version-Locator.ico</string>
                         </object>
                       </void>
                     </object>
@@ -68,22 +68,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10002" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .mfa file association">
+              <action name="" id="10002" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .amsa file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Fasta File</string>
+                        <string>AMSA File</string>
                       </void>
                       <void property="extension">
-                        <string>mfa</string>
+                        <string>amsa</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -94,7 +94,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -103,22 +103,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10003" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .fastq file association">
+              <action name="" id="10003" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .annotations file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Fasta File</string>
+                        <string>Jalview Annotations File</string>
                       </void>
                       <void property="extension">
-                        <string>fastq</string>
+                        <string>annotations</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -129,7 +129,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -138,22 +138,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10004" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pfam file association">
+              <action name="" id="10004" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .jvannotations file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>PFAM File</string>
+                        <string>Jalview Annotations File</string>
                       </void>
                       <void property="extension">
-                        <string>pfam</string>
+                        <string>jvannotations</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -164,7 +164,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -173,22 +173,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10005" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .sto file association">
+              <action name="" id="10005" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .biojson file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Stockholm File</string>
+                        <string>BioJSON File</string>
                       </void>
                       <void property="extension">
-                        <string>sto</string>
+                        <string>biojson</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -199,7 +199,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -208,22 +208,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10006" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .stk file association">
+              <action name="" id="10006" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .BLC file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Stockholm File</string>
+                        <string>BLC File</string>
                       </void>
                       <void property="extension">
-                        <string>stk</string>
+                        <string>BLC</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -234,7 +234,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -243,22 +243,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10007" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pir file association">
+              <action name="" id="10007" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .blc file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>PIR File</string>
+                        <string>BLC File</string>
                       </void>
                       <void property="extension">
-                        <string>pir</string>
+                        <string>blc</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -269,7 +269,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -278,22 +278,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10008" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .BLC file association">
+              <action name="" id="10008" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .aln file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>BLC File</string>
+                        <string>Clustal File</string>
                       </void>
                       <void property="extension">
-                        <string>BLC</string>
+                        <string>aln</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -304,7 +304,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -313,22 +313,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10009" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .amsa file association">
+              <action name="" id="10009" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .fa file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>AMSA File</string>
+                        <string>Fasta File</string>
                       </void>
                       <void property="extension">
-                        <string>amsa</string>
+                        <string>fa</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -339,7 +339,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -348,22 +348,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10010" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .html file association">
+              <action name="" id="10010" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .fasta file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>HTML File</string>
+                        <string>Fasta File</string>
                       </void>
                       <void property="extension">
-                        <string>html</string>
+                        <string>fasta</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -374,7 +374,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -383,22 +383,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10011" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .xml file association">
+              <action name="" id="10011" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .features file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>RNAML File</string>
+                        <string>Jalview Features File</string>
                       </void>
                       <void property="extension">
-                        <string>xml</string>
+                        <string>features</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -409,7 +409,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -418,22 +418,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10012" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .rnaml file association">
+              <action name="" id="10012" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .jvfeatures file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>RNAML File</string>
+                        <string>Jalview Features File</string>
                       </void>
                       <void property="extension">
-                        <string>rnaml</string>
+                        <string>jvfeatures</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -444,7 +444,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -453,22 +453,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10013" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .json file association">
+              <action name="" id="10013" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .gff2 file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>JSON File</string>
+                        <string>Generic Features Format v2 File</string>
                       </void>
                       <void property="extension">
-                        <string>json</string>
+                        <string>gff2</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -479,7 +479,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -488,22 +488,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10014" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pileup file association">
+              <action name="" id="10014" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .gff3 file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>PileUp File</string>
+                        <string>Generic Features Format v3 File</string>
                       </void>
                       <void property="extension">
-                        <string>pileup</string>
+                        <string>gff3</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -514,7 +514,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -523,22 +523,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10015" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .msf file association">
+              <action name="" id="10015" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .concise file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>MSF File</string>
+                        <string>JnetFile File</string>
                       </void>
                       <void property="extension">
-                        <string>msf</string>
+                        <string>concise</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -549,7 +549,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -558,22 +558,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10016" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .aln file association">
+              <action name="" id="10016" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .jnet file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Clustal File</string>
+                        <string>JnetFile File</string>
                       </void>
                       <void property="extension">
-                        <string>aln</string>
+                        <string>jnet</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -584,7 +584,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -593,22 +593,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10017" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .phy file association">
+              <action name="" id="10017" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .cif file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>PHYLIP File</string>
+                        <string>mmCIF File</string>
                       </void>
                       <void property="extension">
-                        <string>phy</string>
+                        <string>cif</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -619,7 +619,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -628,22 +628,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10018" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .gff2 file association">
+              <action name="" id="10018" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .mcif file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>GFF or Jalview features File</string>
+                        <string>mmCIF File</string>
                       </void>
                       <void property="extension">
-                        <string>gff2</string>
+                        <string>mcif</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -654,7 +654,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -663,22 +663,57 @@
                 <condition />
               </action>
 
-              <action name="" id="10019" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .gff3 file association">
+              <action name="" id="10019" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .mmcif file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>GFF or Jalview features File</string>
+                        <string>mmCIF File</string>
                       </void>
                       <void property="extension">
-                        <string>gff3</string>
+                        <string>mmcif</string>
+                      </void>
+                      <void property="launcherId">
+                        <string>737</string>
+                      </void>
+                      <void property="macIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.icns</string>
+                        </object>
+                      </void>
+                      <void property="macRole">
+                        <object class="java.lang.Enum" method="valueOf">
+                          <class>com.install4j.runtime.beans.actions.desktop.MacAssociationRole</class>
+                          <string>EDITOR</string>
+                        </object>
+                      </void>
+                      <void property="windowsIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.ico</string>
+                        </object>
+                      </void>
+                    </object>
+                  </java>
+                </serializedBean>
+                <condition />
+              </action>
+
+              <action name="" id="10020" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .msf file association">
+                <serializedBean>
+                  <java class="java.beans.XMLDecoder">
+                    <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
+                      <void property="description">
+                        <string>MSF File</string>
+                      </void>
+                      <void property="extension">
+                        <string>msf</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -689,7 +724,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -698,7 +733,7 @@
                 <condition />
               </action>
 
-              <action name="" id="10020" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pdb file association">
+              <action name="" id="10021" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pdb file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
@@ -713,7 +748,7 @@
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -724,7 +759,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -733,7 +768,7 @@
                 <condition />
               </action>
 
-              <action name="" id="10021" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .ent file association">
+              <action name="" id="10022" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .ent file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
@@ -748,7 +783,7 @@
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -759,7 +794,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -768,22 +803,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10022" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .cif file association">
+              <action name="" id="10023" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pfam file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>mmCIF File</string>
+                        <string>PFAM File</string>
                       </void>
                       <void property="extension">
-                        <string>cif</string>
+                        <string>pfam</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -794,7 +829,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -803,22 +838,22 @@
                 <condition />
               </action>
 
-              <action name="" id="10023" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .jvp file association">
+              <action name="" id="10024" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .phy file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Jalview File</string>
+                        <string>PHYLIP File</string>
                       </void>
                       <void property="extension">
-                        <string>jvp</string>
+                        <string>phy</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -829,7 +864,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>
@@ -838,22 +873,197 @@
                 <condition />
               </action>
 
-              <action name="" id="10024" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .jar file association">
+              <action name="" id="10025" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pileup file association">
                 <serializedBean>
                   <java class="java.beans.XMLDecoder">
                     <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
                       <void property="description">
-                        <string>Jalview File</string>
+                        <string>PileUp File</string>
                       </void>
                       <void property="extension">
-                        <string>jar</string>
+                        <string>pileup</string>
+                      </void>
+                      <void property="launcherId">
+                        <string>737</string>
+                      </void>
+                      <void property="macIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.icns</string>
+                        </object>
+                      </void>
+                      <void property="macRole">
+                        <object class="java.lang.Enum" method="valueOf">
+                          <class>com.install4j.runtime.beans.actions.desktop.MacAssociationRole</class>
+                          <string>EDITOR</string>
+                        </object>
+                      </void>
+                      <void property="windowsIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.ico</string>
+                        </object>
+                      </void>
+                    </object>
+                  </java>
+                </serializedBean>
+                <condition />
+              </action>
+
+              <action name="" id="10026" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .pir file association">
+                <serializedBean>
+                  <java class="java.beans.XMLDecoder">
+                    <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
+                      <void property="description">
+                        <string>PIR File</string>
+                      </void>
+                      <void property="extension">
+                        <string>pir</string>
+                      </void>
+                      <void property="launcherId">
+                        <string>737</string>
+                      </void>
+                      <void property="macIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.icns</string>
+                        </object>
+                      </void>
+                      <void property="macRole">
+                        <object class="java.lang.Enum" method="valueOf">
+                          <class>com.install4j.runtime.beans.actions.desktop.MacAssociationRole</class>
+                          <string>EDITOR</string>
+                        </object>
+                      </void>
+                      <void property="windowsIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.ico</string>
+                        </object>
+                      </void>
+                    </object>
+                  </java>
+                </serializedBean>
+                <condition />
+              </action>
+
+              <action name="" id="10027" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .rnaml file association">
+                <serializedBean>
+                  <java class="java.beans.XMLDecoder">
+                    <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
+                      <void property="description">
+                        <string>RNAML File</string>
+                      </void>
+                      <void property="extension">
+                        <string>rnaml</string>
+                      </void>
+                      <void property="launcherId">
+                        <string>737</string>
+                      </void>
+                      <void property="macIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.icns</string>
+                        </object>
+                      </void>
+                      <void property="macRole">
+                        <object class="java.lang.Enum" method="valueOf">
+                          <class>com.install4j.runtime.beans.actions.desktop.MacAssociationRole</class>
+                          <string>EDITOR</string>
+                        </object>
+                      </void>
+                      <void property="windowsIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.ico</string>
+                        </object>
+                      </void>
+                    </object>
+                  </java>
+                </serializedBean>
+                <condition />
+              </action>
+
+              <action name="" id="10028" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .mat file association">
+                <serializedBean>
+                  <java class="java.beans.XMLDecoder">
+                    <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
+                      <void property="description">
+                        <string>Substitution Matrix File</string>
+                      </void>
+                      <void property="extension">
+                        <string>mat</string>
+                      </void>
+                      <void property="launcherId">
+                        <string>737</string>
+                      </void>
+                      <void property="macIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.icns</string>
+                        </object>
+                      </void>
+                      <void property="macRole">
+                        <object class="java.lang.Enum" method="valueOf">
+                          <class>com.install4j.runtime.beans.actions.desktop.MacAssociationRole</class>
+                          <string>EDITOR</string>
+                        </object>
+                      </void>
+                      <void property="windowsIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.ico</string>
+                        </object>
+                      </void>
+                    </object>
+                  </java>
+                </serializedBean>
+                <condition />
+              </action>
+
+              <action name="" id="10029" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .sto file association">
+                <serializedBean>
+                  <java class="java.beans.XMLDecoder">
+                    <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
+                      <void property="description">
+                        <string>Stockholm File</string>
+                      </void>
+                      <void property="extension">
+                        <string>sto</string>
+                      </void>
+                      <void property="launcherId">
+                        <string>737</string>
+                      </void>
+                      <void property="macIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.icns</string>
+                        </object>
+                      </void>
+                      <void property="macRole">
+                        <object class="java.lang.Enum" method="valueOf">
+                          <class>com.install4j.runtime.beans.actions.desktop.MacAssociationRole</class>
+                          <string>EDITOR</string>
+                        </object>
+                      </void>
+                      <void property="windowsIconFile">
+                        <object class="com.install4j.api.beans.ExternalFile">
+                          <string>Jalview-File.ico</string>
+                        </object>
+                      </void>
+                    </object>
+                  </java>
+                </serializedBean>
+                <condition />
+              </action>
+
+              <action name="" id="10030" customizedId="" beanClass="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction" enabled="true" commentSet="false" comment="" actionElevationType="elevated" rollbackBarrier="false" rollbackBarrierExitCode="0" multiExec="false" failureStrategy="1" errorMessage="Could not make .stk file association">
+                <serializedBean>
+                  <java class="java.beans.XMLDecoder">
+                    <object class="com.install4j.runtime.beans.actions.desktop.CreateFileAssociationAction">
+                      <void property="description">
+                        <string>Stockholm File</string>
+                      </void>
+                      <void property="extension">
+                        <string>stk</string>
                       </void>
                       <void property="launcherId">
                         <string>737</string>
                       </void>
                       <void property="macIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.icns</string>
+                          <string>Jalview-File.icns</string>
                         </object>
                       </void>
                       <void property="macRole">
@@ -864,7 +1074,7 @@
                       </void>
                       <void property="windowsIconFile">
                         <object class="com.install4j.api.beans.ExternalFile">
-                          <string>./Jalview-File.ico</string>
+                          <string>Jalview-File.ico</string>
                         </object>
                       </void>
                     </object>