source.jalview.org Git - jalview.git/commit

git://source.jalview.org / jalview.git / commit

author	tcofoegbu <tcnofoegbu@dundee.ac.uk>
	Fri, 7 Aug 2015 13:59:50 +0000 (14:59 +0100)
committer	tcofoegbu <tcnofoegbu@dundee.ac.uk>
	Fri, 7 Aug 2015 13:59:50 +0000 (14:59 +0100)
commit	06e3a52df5af8243cdb67c023c8ddd834711ad36
tree	f6c59fe0334425833afd951a08275812105f25ab	tree \| snapshot
parent	2d03102b7c6af888fda6676a90497b8d71a14f11	commit \| diff

JAL-1824 updated caching procedure for pdb entries. Also refactored getPDBEntry method in SequenceI to getAllPDBEntries as it returns a collection of all available PDBEntry

22 files changed:

src/MCview/PDBfile.java		diff \| blob \| history
src/jalview/analysis/SeqsetUtils.java		diff \| blob \| history
src/jalview/appletgui/APopupMenu.java		diff \| blob \| history
src/jalview/appletgui/AlignFrame.java		diff \| blob \| history
src/jalview/appletgui/ExtJmol.java		diff \| blob \| history
src/jalview/datamodel/PDBEntry.java		diff \| blob \| history
src/jalview/datamodel/Sequence.java		diff \| blob \| history
src/jalview/datamodel/SequenceI.java		diff \| blob \| history
src/jalview/gui/AlignViewport.java		diff \| blob \| history
src/jalview/gui/AppJmol.java		diff \| blob \| history
src/jalview/gui/ChimeraViewFrame.java		diff \| blob \| history
src/jalview/gui/Jalview2XML.java		diff \| blob \| history
src/jalview/gui/PopupMenu.java		diff \| blob \| history
src/jalview/gui/StructureChooser.java		diff \| blob \| history
src/jalview/io/FileLoader.java		diff \| blob \| history
src/jalview/ws/dbsources/Pdb.java		diff \| blob \| history
test/MCview/PDBfileTest.java		diff \| blob \| history
test/jalview/ext/rbvi/chimera/JalviewChimeraView.java		diff \| blob \| history
test/jalview/io/AnnotatedPDBFileInputTest.java		diff \| blob \| history
test/jalview/io/StockholmFileTest.java		diff \| blob \| history
test/jalview/util/DBRefUtilsTest.java		diff \| blob \| history
test/jalview/ws/PDBSequenceFetcherTest.java		diff \| blob \| history

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