JAL-3032 just the changes pulled already
authorhansonr <hansonr@stolaf.edu>
Wed, 27 Jun 2018 10:25:33 +0000 (11:25 +0100)
committerhansonr <hansonr@stolaf.edu>
Wed, 27 Jun 2018 10:25:33 +0000 (11:25 +0100)
commit26501f76ef450657c530de489b8404356a98aca3
tree35c0bbf6361f3a778065be864cd5d4989ef17673
parente0cb20bd71f4e90314f1c20ea8359d23016b64fe
JAL-3032 just the changes pulled already
49 files changed:
.ant-targets-build.xml
.classpath
.classpath.js [new file with mode: 0644]
RELEASE
THIRDPARTYLIBS
build.xml
help/help.jhm
help/helpTOC.xml
help/html/editing/index.html
help/html/features/clarguments.html
help/html/features/dasfeatures.html [deleted file]
help/html/features/dassettings.html [deleted file]
help/html/features/preferences.html
help/html/features/search.html
help/html/features/searchclearhist.png
help/html/features/seqfeatures.html
help/html/features/seqfetch.html
help/html/menus/alignmentMenu.html
help/html/menus/alwview.html
help/html/menus/wsmenu.html
help/html/releases.html
help/html/webServices/dbreffetcher.html
help/html/webServices/index.html
lib/jdas-1.0.4.jar [deleted file]
nbbuild.xml
src/jalview/bin/Cache.java
src/jalview/bin/Jalview.java
src/jalview/gui/DasSourceBrowser.java [deleted file]
src/jalview/gui/FeatureSettings.java
src/jalview/gui/JDatabaseTree.java
src/jalview/gui/OverviewPanel.java
src/jalview/gui/Preferences.java
src/jalview/gui/SequenceFetcher.java
src/jalview/io/cache/JvCacheableInputBox.java
src/jalview/jbgui/GPreferences.java
src/jalview/renderer/OverviewRenderer.java
src/jalview/ws/DBRefFetcher.java
src/jalview/ws/DasSequenceFeatureFetcher.java [deleted file]
src/jalview/ws/SequenceFetcher.java
src/jalview/ws/dbsources/das/api/DasSourceRegistryI.java [deleted file]
src/jalview/ws/dbsources/das/api/jalviewSourceI.java [deleted file]
src/jalview/ws/dbsources/das/datamodel/DasSequenceSource.java [deleted file]
src/jalview/ws/dbsources/das/datamodel/DasSourceRegistry.java [deleted file]
src/jalview/ws/dbsources/das/datamodel/JalviewSource.java [deleted file]
test/jalview/analysis/CrossRefTest.java
test/jalview/ws/PDBSequenceFetcherTest.java
test/jalview/ws/SequenceFetcherTest.java
test/jalview/ws/dbsources/RemoteFormatTest.java
test/jalview/ws/seqfetcher/DasSequenceFetcher.java [deleted file]