source.jalview.org Git - jalview.git/commit

author	gmungoc <g.m.carstairs@dundee.ac.uk>
	Mon, 19 Jan 2015 17:18:20 +0000 (17:18 +0000)
committer	gmungoc <g.m.carstairs@dundee.ac.uk>
	Mon, 19 Jan 2015 17:18:20 +0000 (17:18 +0000)
commit	285b51fa6f49054040c72dfb2a64db637dc05c79
tree	4869558cda17a3ce0fa02549cc67e07df29eacf7	tree \| snapshot
parent	1d21f595873869193bd4821e1af9c4eb56c5f158	commit \| diff

JAL-1619 refactored cDNA translation; modified codon comparison; tests

12 files changed:

src/jalview/analysis/AlignmentUtils.java		diff \| blob \| history
src/jalview/analysis/CodonComparator.java	[new file with mode: 0644]	blob
src/jalview/analysis/Dna.java		diff \| blob \| history
src/jalview/datamodel/AlignedCodon.java	[new file with mode: 0644]	blob
src/jalview/datamodel/AlignedCodonFrame.java		diff \| blob \| history
src/jalview/gui/AlignFrame.java		diff \| blob \| history
test/jalview/analysis/AlignmentUtilsTests.java		diff \| blob \| history
test/jalview/analysis/DnaAlignmentGenerator.java	[new file with mode: 0644]	blob
test/jalview/analysis/DnaTest.java		diff \| blob \| history
test/jalview/datamodel/AlignedCodonFrameTest.java		diff \| blob \| history
test/jalview/datamodel/AlignedCodonTest.java	[new file with mode: 0644]	blob
test/jalview/datamodel/AlignmentTest.java		diff \| blob \| history