JAL-1793 update spike build to latest incl stop and synonymous variants on peptides
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 30 Jan 2018 16:07:17 +0000 (16:07 +0000)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 30 Jan 2018 16:07:17 +0000 (16:07 +0000)
commit321caefc5a40cd735c93e0bfa450e0e04abc485d
tree0d378f1aaf53f513f4da4107365d564b1dcf770a
parent14b1b2a878190d5fffda298c4b9a901c72c74ad3
JAL-1793 update spike build to latest incl stop and synonymous variants on peptides
29 files changed:
RELEASE
benchmarking/README
help/help.jhm
help/html/releases.html
help/html/whatsNew.html
resources/lang/Messages.properties
resources/lang/Messages_es.properties
src/jalview/analysis/AlignmentUtils.java
src/jalview/analysis/Dna.java
src/jalview/ext/ensembl/EnsemblCdna.java
src/jalview/ext/ensembl/EnsemblFeatures.java
src/jalview/ext/ensembl/EnsemblGene.java
src/jalview/ext/ensembl/EnsemblGenome.java
src/jalview/ext/ensembl/EnsemblLookup.java
src/jalview/ext/ensembl/EnsemblSeqProxy.java
src/jalview/ext/ensembl/EnsemblSequenceFetcher.java
src/jalview/ext/ensembl/EnsemblSymbol.java
src/jalview/fts/core/GFTSPanel.java
src/jalview/gui/CrossRefAction.java
src/jalview/gui/StructureChooser.java
src/jalview/io/gff/SequenceOntologyI.java
src/jalview/jbgui/GStructureChooser.java
src/jalview/schemes/ResidueProperties.java
test/jalview/analysis/AlignmentUtilsTests.java
test/jalview/ext/ensembl/EnsemblCdnaTest.java
test/jalview/ext/ensembl/EnsemblGeneTest.java
test/jalview/ext/ensembl/EnsemblSeqProxyTest.java
test/jalview/gui/StructureChooserTest.java
test/jalview/io/vcf/VCFLoaderTest.java