Site resources for running pages with swingjs/JalviewJS.js
authorhansonr <hansonr@STO24954W.ad.stolaf.edu>
Mon, 13 May 2019 02:26:58 +0000 (21:26 -0500)
committerhansonr <hansonr@STO24954W.ad.stolaf.edu>
Mon, 13 May 2019 02:26:58 +0000 (21:26 -0500)
commit3f8a9801f25c5edc1a80ae9c8e8467b56954c202
tree17c16c7d7cf61bf356cca2b521d3aa621f221113
parent4b0220906ff60a04786c3f3eb95fa306407f27c7
Site resources for running pages with swingjs/JalviewJS.js

JalviewJS.js just a very thin implementation, enough to show a "Start
Jalview" button, read the <applet> tag for parameters, and to start the
applet when that button is pressed.

Using the applet tags allows support for both Java and JavaScript for
pages that have Jalview <applet> tags. (Java right now requires
?_USE=JAVA)

Info.resourcePath is used by jalview.bin.AppletParams to ensure that the
directory with the resources is found.

applets.html is functioning in a preliminary demo mode

 - <applet> tag read successfully
 - Info.resourcePath read successfully
 - Info and applet parameters transferred successfully
 - .fa and features files read successfully
 - embedding and floating frames supported
 - initial "Start Jalview" buttons working
 - when VARNA 2D or other window is displays, others hide.
     (probably because Desktop is in the DOM but hidden).
39 files changed:
site-resources/applets.html [new file with mode: 0644]
site-resources/css/ie6.css [new file with mode: 0644]
site-resources/css/ie7.css [new file with mode: 0644]
site-resources/css/reset.css [new file with mode: 0644]
site-resources/css/style.css [new file with mode: 0644]
site-resources/examples/1gaq.txt [new file with mode: 0644]
site-resources/examples/2GIS.pdb [new file with mode: 0644]
site-resources/examples/3W5V.pdb [new file with mode: 0644]
site-resources/examples/backupfilestest.fa [new file with mode: 0644]
site-resources/examples/biojsonschema.json [new file with mode: 0644]
site-resources/examples/dna_interleaved.phy [new file with mode: 0644]
site-resources/examples/dna_sequential.phy [new file with mode: 0644]
site-resources/examples/estrogenReceptorCdna.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorCdna_aln.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorCdna_frag.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein.aln [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein_aln.fa [new file with mode: 0644]
site-resources/examples/estrogenReceptorProtein_frag.fa [new file with mode: 0644]
site-resources/examples/example.json [new file with mode: 0644]
site-resources/examples/ferredoxin.nw [new file with mode: 0644]
site-resources/examples/jpred_msa.fasta [new file with mode: 0644]
site-resources/examples/jpred_msa.seq.concise [new file with mode: 0644]
site-resources/examples/plantfdx.annotations [new file with mode: 0644]
site-resources/examples/plantfdx.fa [new file with mode: 0644]
site-resources/examples/plantfdx.features [new file with mode: 0644]
site-resources/examples/unfolded_RF00031.aln [new file with mode: 0644]
site-resources/examples/uniref50.score_ascii [new file with mode: 0644]
site-resources/examples/uniref50_mz.fa [new file with mode: 0644]
site-resources/javascript/JalviewApplet.js [new file with mode: 0644]
site-resources/javascript/deployJava.js [new file with mode: 0644]
site-resources/javascript/facebox-1.3.js [new file with mode: 0644]
site-resources/javascript/jalview.js [new file with mode: 0644]
site-resources/javascript/jquery-1.4.4.min.js [new file with mode: 0644]
site-resources/javascript/jquery.blockUI.js [new file with mode: 0644]
site-resources/javascript/jquery.timer.js [new file with mode: 0644]
site-resources/javascript/jshashtable-2.1.js [new file with mode: 0644]
site-resources/javascript/jvcontroller.js [new file with mode: 0644]
site-resources/swingjs/JalviewApplet.js [new file with mode: 0644]