JAL-3253-applet JAL-3383
authorhansonr <hansonr@STO24954W.ad.stolaf.edu>
Mon, 29 Jul 2019 21:05:34 +0000 (16:05 -0500)
committerhansonr <hansonr@STO24954W.ad.stolaf.edu>
Tue, 30 Jul 2019 18:09:10 +0000 (13:09 -0500)
commit4435c731351c802772dd1355fdb5747cfacd7838
tree5a86839f39a3caae2e3882da9ddbc1691da7dea5
parent2d241446c80365862d31e76f2ecccaab33a1547f
parenta435a8668f8df568d3bdcf4e286210b69c18920c
JAL-3253-applet JAL-3383

Significant improvement to Overview rendering. See JAL-3383 issue for
details.
27 files changed:
src/jalview/api/AlignmentColsCollectionI.java
src/jalview/appletgui/OverviewCanvas.java
src/jalview/appletgui/OverviewPanel.java
src/jalview/datamodel/Alignment.java
src/jalview/datamodel/AlignmentI.java
src/jalview/datamodel/AllColsCollection.java
src/jalview/datamodel/HiddenColumns.java
src/jalview/datamodel/Sequence.java
src/jalview/datamodel/SequenceI.java
src/jalview/datamodel/VisibleColsCollection.java
src/jalview/gui/AlignFrame.java
src/jalview/gui/AlignmentPanel.java
src/jalview/gui/FeatureRenderer.java
src/jalview/gui/OverviewCanvas.java
src/jalview/gui/OverviewPanel.java
src/jalview/gui/ScalePanel.java
src/jalview/gui/SeqCanvas.java
src/jalview/gui/SeqPanel.java
src/jalview/io/AlignFile.java
src/jalview/io/FeaturesFile.java
src/jalview/jbgui/GAlignmentPanel.java
src/jalview/renderer/OverviewRenderer.java
src/jalview/renderer/OverviewResColourFinder.java
src/jalview/renderer/ResidueColourFinder.java
src/jalview/renderer/seqfeatures/FeatureColourFinder.java
src/jalview/viewmodel/OverviewDimensions.java
src/jalview/viewmodel/seqfeatures/FeatureRendererModel.java