JAL-3070 rough-and-ready refactor of JABA SequenceAnnotation style services - needs...
authorJim Procter <jprocter@issues.jalview.org>
Fri, 20 Sep 2019 16:01:57 +0000 (17:01 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Fri, 20 Sep 2019 16:05:43 +0000 (17:05 +0100)
commit47ecacc91ed5d80b59b42d255ef5c13e79d3dfa0
treeae5a7ef2b7d75fbc218c33f4c0627de7b8f330d9
parent128f413cad94e4675d241f8079dd275a4199b6d8
JAL-3070 rough-and-ready refactor of JABA SequenceAnnotation style services - needs some review and refinement
25 files changed:
src/jalview/workers/AlignCalcWorker.java
src/jalview/ws/api/SequenceAnnotationServiceI.java [new file with mode: 0644]
src/jalview/ws/api/WSAnnotationCalcManagerI.java [new file with mode: 0644]
src/jalview/ws/gui/AnnotationWsJob.java [new file with mode: 0644]
src/jalview/ws/gui/MsaWSJob.java
src/jalview/ws/gui/WsJob.java
src/jalview/ws/jws2/AAConClient.java [deleted file]
src/jalview/ws/jws2/AADisorderClient.java [deleted file]
src/jalview/ws/jws2/AbstractJabaCalcWorker.java
src/jalview/ws/jws2/Jws2Client.java
src/jalview/ws/jws2/Jws2ClientFactory.java [new file with mode: 0644]
src/jalview/ws/jws2/MsaWSClient.java
src/jalview/ws/jws2/SequenceAnnotationWSClient.java
src/jalview/ws/jws2/jabaws2/AAConClient.java [new file with mode: 0644]
src/jalview/ws/jws2/jabaws2/AADisorderClient.java [new file with mode: 0644]
src/jalview/ws/jws2/jabaws2/JabawsAnnotationInstance.java [moved from src/jalview/ws/jws2/JabawsCalcWorker.java with 51% similarity]
src/jalview/ws/jws2/jabaws2/JabawsMsaInstance.java
src/jalview/ws/jws2/jabaws2/JabawsMsaInterfaceAlignCalcWorker.java
src/jalview/ws/jws2/jabaws2/JabawsServiceInstance.java [new file with mode: 0644]
src/jalview/ws/jws2/jabaws2/Jws2Instance.java
src/jalview/ws/jws2/jabaws2/Jws2InstanceFactory.java
src/jalview/ws/jws2/jabaws2/RNAalifoldClient.java [moved from src/jalview/ws/jws2/RNAalifoldClient.java with 72% similarity]
src/jalview/ws/uimodel/AlignAnalysisUIText.java
test/jalview/ws/jabaws/DisorderAnnotExportImport.java
test/jalview/ws/jabaws/RNAStructExportImport.java