JAL-1632 'includeGaps' applied to FeatureDistanceModel (needs review)
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 28 Feb 2017 16:53:12 +0000 (16:53 +0000)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 28 Feb 2017 16:53:12 +0000 (16:53 +0000)
commit693e17575680c94d9bdc5797faa0b328bb6f7c05
treecde3ab732fbcbdfb3b04562bacc5dd8c42cf1157
parentf56a081f0c0174cf6a5b8799a5531ddbdb71f20f
JAL-1632 'includeGaps' applied to FeatureDistanceModel (needs review)
src/jalview/analysis/scoremodels/FeatureDistanceModel.java
src/jalview/analysis/scoremodels/PIDModel.java
src/jalview/analysis/scoremodels/ScoreMatrix.java
src/jalview/analysis/scoremodels/SimilarityParams.java
src/jalview/api/analysis/SimilarityParamsI.java
test/jalview/analysis/scoremodels/FeatureDistanceModelTest.java
test/jalview/analysis/scoremodels/ScoreMatrixTest.java