JAL-1705 reworked AlignmentUtils.makeCdsAlignment and associated code
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Fri, 1 Apr 2016 15:46:20 +0000 (16:46 +0100)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Fri, 1 Apr 2016 15:46:20 +0000 (16:46 +0100)
commit6ed535f7ef953468f8827255ec6ebcd5a6e54d8d
tree8ae1fd8485c04ae870cba8a4266862e38c782cf0
parent8c4b7ec68807806bfc88a3c3c3df132e849390f5
JAL-1705 reworked AlignmentUtils.makeCdsAlignment and associated code
src/jalview/analysis/AlignmentUtils.java
src/jalview/analysis/CrossRef.java
src/jalview/datamodel/AlignedCodonFrame.java
src/jalview/datamodel/Alignment.java
src/jalview/gui/AlignFrame.java
test/jalview/analysis/AlignmentUtilsTests.java
test/jalview/datamodel/AlignedCodonFrameTest.java
test/jalview/datamodel/AlignmentTest.java
test/jalview/ws/SequenceFetcherTest.java
test/jalview/ws/seqfetcher/DbRefFetcherTest.java