clean up
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Wed, 20 Aug 2014 01:07:03 +0000 (01:07 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Wed, 20 Aug 2014 01:07:03 +0000 (01:07 +0000)
commit7e567e18a5ba32035a8db4ca041023c9e862d25b
tree9ec1854f9b55b3934e5e09097e86e7f754507e41
parentbf4f34e0511813622f68e54ffb783e4e6d92bfa4
clean up
34 files changed:
forester/java/src/org/forester/analysis/AncestralTaxonomyInference.java
forester/java/src/org/forester/analysis/TaxonomyDataManager.java
forester/java/src/org/forester/application/msa_compactor.java
forester/java/src/org/forester/application/rio.java
forester/java/src/org/forester/application/surfacing.java
forester/java/src/org/forester/archaeopteryx/AptxUtil.java
forester/java/src/org/forester/archaeopteryx/ArchaeopteryxE.java
forester/java/src/org/forester/archaeopteryx/Configuration.java
forester/java/src/org/forester/archaeopteryx/Constants.java
forester/java/src/org/forester/archaeopteryx/ControlPanel.java
forester/java/src/org/forester/archaeopteryx/MainFrame.java
forester/java/src/org/forester/archaeopteryx/MainFrameApplet.java
forester/java/src/org/forester/archaeopteryx/MainFrameApplication.java
forester/java/src/org/forester/archaeopteryx/Options.java
forester/java/src/org/forester/archaeopteryx/TreeColorSet.java
forester/java/src/org/forester/archaeopteryx/TreePanel.java
forester/java/src/org/forester/archaeopteryx/TreePanelUtil.java
forester/java/src/org/forester/archaeopteryx/phylogeny/data/RenderablePhylogenyData.java
forester/java/src/org/forester/archaeopteryx/phylogeny/data/RenderableVector.java
forester/java/src/org/forester/evoinference/distance/NeighborJoining.java
forester/java/src/org/forester/evoinference/distance/NeighborJoiningF.java
forester/java/src/org/forester/evoinference/distance/NeighborJoiningR.java
forester/java/src/org/forester/evoinference/distance/Sarray.java
forester/java/src/org/forester/go/BasicGoRelationship.java
forester/java/src/org/forester/go/GoRelationship.java
forester/java/src/org/forester/msa/DeleteableMsa.java
forester/java/src/org/forester/phylogeny/PhylogenyMethods.java
forester/java/src/org/forester/phylogeny/data/NodeData.java
forester/java/src/org/forester/phylogeny/data/Taxonomy.java
forester/java/src/org/forester/rio/RIO.java
forester/java/src/org/forester/surfacing/AdjactantDirectedBinaryDomainCombination.java
forester/java/src/org/forester/surfacing/BasicBinaryDomainCombination.java
forester/java/src/org/forester/surfacing/DirectedBinaryDomainCombination.java
forester/java/src/org/forester/surfacing/DomainSimilarity.java