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(parent: 28c232b) | patch
JAL-3116 Uniprot XML unmarshalled using JAXB not Castor
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Thu, 13 Sep 2018 15:28:27 +0000 (16:28 +0100)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Thu, 13 Sep 2018 15:28:27 +0000 (16:28 +0100)
commit88515cdb74e4603a40c8c1dca14107b5ca503e04
treee0f402be057bde4491f4fb7fae62fd3ada43ed73tree | snapshot
parent28c232b27469433dd85d3a09ecf8b6e2ff09eeadcommit | diff
JAL-3116 Uniprot XML unmarshalled using JAXB not Castor
45 files changed:
resources/uniprot_mapping.xml [deleted file] blob | history
schemas/uniprot.xsd [new file with mode: 0644] blob
src/jalview/datamodel/xdb/uniprot/UniprotEntry.java [deleted file] blob | history
src/jalview/datamodel/xdb/uniprot/UniprotFeature.java [deleted file] blob | history
src/jalview/datamodel/xdb/uniprot/UniprotFile.java [deleted file] blob | history
src/jalview/datamodel/xdb/uniprot/UniprotProteinName.java [deleted file] blob | history
src/jalview/datamodel/xdb/uniprot/UniprotSequence.java [deleted file] blob | history
src/jalview/ws/dbsources/Uniprot.java diff | blob | history
src/jalview/xml/binding/uniprot/CitationType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/CofactorType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/CommentType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/ConsortiumType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/DbReferenceType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/Entry.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/EventType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/EvidenceType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/EvidencedStringType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/FeatureType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/GeneLocationType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/GeneNameType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/GeneType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/ImportedFromType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/InteractantType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/IsoformType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/KeywordType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/LocationType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/MoleculeType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/NameListType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/ObjectFactory.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/OrganismNameType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/OrganismType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/PersonType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/PositionType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/PropertyType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/ProteinExistenceType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/ProteinType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/ReferenceType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/SequenceType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/SourceDataType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/SourceType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/StatusType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/SubcellularLocationType.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/Uniprot.java [new file with mode: 0644] blob
src/jalview/xml/binding/uniprot/package-info.java [new file with mode: 0644] blob
test/jalview/ws/dbsources/UniprotTest.java diff | blob | history