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(parent: 5f2d812) | patch
JAL-3035 - jalview-das is no more !
authorJim Procter <jprocter@issues.jalview.org>
Tue, 26 Jun 2018 15:16:15 +0000 (16:16 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Tue, 26 Jun 2018 15:16:15 +0000 (16:16 +0100)
commitb483c2012e40cab4b38f650dc049c94efe7e27c2
tree2a5a662257739f0ead772c6b6a759ae39e2d080etree | snapshot
parent5f2d8127ebf9a6bcd4a57e85d3b635ffd77cc6bdcommit | diff
JAL-3035 - jalview-das is no more !
 - jsdas lib removed
 - DAS settings panel deleted (Feature settings pane has no tabs now)
 - all code for wrapping DAS sources and retrieving sequences and features from them is gone
 - test methods/main methods have been de-dasified or removed if their only purpose was to test DAS source discovery
 - fancy sorting code to account for DAS sequence source names has been removed
23 files changed:
.classpath diff | blob | history
lib/jdas-1.0.4.jar [deleted file] blob | history
src/jalview/bin/Cache.java diff | blob | history
src/jalview/bin/Jalview.java diff | blob | history
src/jalview/gui/DasSourceBrowser.java [deleted file] blob | history
src/jalview/gui/FeatureSettings.java diff | blob | history
src/jalview/gui/JDatabaseTree.java diff | blob | history
src/jalview/gui/Preferences.java diff | blob | history
src/jalview/gui/SequenceFetcher.java diff | blob | history
src/jalview/jbgui/GPreferences.java diff | blob | history
src/jalview/ws/DBRefFetcher.java diff | blob | history
src/jalview/ws/DasSequenceFeatureFetcher.java [deleted file] blob | history
src/jalview/ws/SequenceFetcher.java diff | blob | history
src/jalview/ws/dbsources/das/api/DasSourceRegistryI.java [deleted file] blob | history
src/jalview/ws/dbsources/das/api/jalviewSourceI.java [deleted file] blob | history
src/jalview/ws/dbsources/das/datamodel/DasSequenceSource.java [deleted file] blob | history
src/jalview/ws/dbsources/das/datamodel/DasSourceRegistry.java [deleted file] blob | history
src/jalview/ws/dbsources/das/datamodel/JalviewSource.java [deleted file] blob | history
test/jalview/analysis/CrossRefTest.java diff | blob | history
test/jalview/ws/PDBSequenceFetcherTest.java diff | blob | history
test/jalview/ws/SequenceFetcherTest.java diff | blob | history
test/jalview/ws/dbsources/RemoteFormatTest.java diff | blob | history
test/jalview/ws/seqfetcher/DasSequenceFetcher.java [deleted file] blob | history