SwingJS runtime update 3.2.9-v1b

SwingJS runtime update 3.2.9-v1b

- mostly fixes from recent SwingJS work involving
 -- expanded FileSystem and temp file management
 -- super-fast HashMap (faster than Java!), HashTable,
    StringBuilder, StringBuffer, NumberFormat, DecimalFormat
 -- improved ResourceBundle
 -- full Locale information
 -- additional BufferedImage/ColorModel/Raster support
- fixes temp files not cached (JSTempFile, for Jmol)
- fixes AbstractStringBuilder.replace() typo
- reverts recent HashSet acceleration due to Jalview
  using String.hashCode() for display order of features