source.jalview.org Git - jalview.git/commit

author	Renia Correya <rcorreya001@dundee.ac.uk>
	Mon, 13 May 2024 09:23:02 +0000 (10:23 +0100)
committer	Renia Correya <rcorreya001@dundee.ac.uk>
	Mon, 13 May 2024 09:23:02 +0000 (10:23 +0100)
commit	9f21fcf9df545f0900a0f86250a14f15c448e30a
tree	f5ec852e4d04ba7a21474853ed40fdbfd8d90649	tree \| snapshot
parent	fccc58b804b576fcd39f3e7f2c9699c0ba75d5f9	commit \| diff

JAL-4386 - Implementation of substitution matrix and test cases.

18 files changed:

resources/lang/Messages.properties		diff \| blob \| history
resources/scoreModel/secondarystructure.scm	[new file with mode: 0644]	blob
src/jalview/analysis/AAFrequency.java		diff \| blob \| history
src/jalview/analysis/AlignmentUtils.java		diff \| blob \| history
src/jalview/analysis/scoremodels/ScoreModels.java		diff \| blob \| history
src/jalview/analysis/scoremodels/SecondaryStructureDistanceModel.java		diff \| blob \| history
src/jalview/appletgui/AlignFrame.java		diff \| blob \| history
src/jalview/gui/CalculationChooser.java		diff \| blob \| history
src/jalview/jbgui/GAlignFrame.java		diff \| blob \| history
src/jalview/renderer/AnnotationRenderer.java		diff \| blob \| history
src/jalview/schemes/ResidueProperties.java		diff \| blob \| history
src/jalview/util/Constants.java	[new file with mode: 0644]	blob
test/jalview/analysis/AlignmentUtilsTests.java		diff \| blob \| history
test/jalview/analysis/scoremodels/SecondaryStructureDistanceModelTest.java		diff \| blob \| history
test/jalview/bin/CommandsTest2.java		diff \| blob \| history
test/jalview/gui/AnnotationChooserTest.java		diff \| blob \| history
test/jalview/gui/AnnotationRowFilterTest.java		diff \| blob \| history
test/jalview/gui/StructureChooserTest.java		diff \| blob \| history