return sequences;\r
}\r
\r
+ public SequenceI [] getSequencesArray()\r
+ {\r
+ SequenceI [] reply = new SequenceI[sequences.size()];\r
+ for(int i=0; i<sequences.size(); i++)\r
+ {\r
+ reply[i] = (SequenceI)sequences.elementAt(i);\r
+ }\r
+ return reply;\r
+ }\r
+\r
/**\r
* DOCUMENT ME!\r
*\r
public Vector getSequences();\r
\r
/**\r
+ * Gets sequences as a SequenceI[]\r
+ *\r
+ * @return All sequences in alignment.\r
+ */\r
+ public SequenceI [] getSequencesArray();\r
+\r
+ /**\r
* Find a specific sequence in this alignment.\r
*\r
* @param i Index of required sequence.\r