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refactored to use SequenceI
author
jprocter
<Jim Procter>
Fri, 7 Jan 2011 13:10:41 +0000
(13:10 +0000)
committer
jprocter
<Jim Procter>
Fri, 7 Jan 2011 13:10:41 +0000
(13:10 +0000)
src/jalview/analysis/SequenceIdMatcher.java
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diff --git
a/src/jalview/analysis/SequenceIdMatcher.java
b/src/jalview/analysis/SequenceIdMatcher.java
index
0046cf5
..
f878a09
100755
(executable)
--- a/
src/jalview/analysis/SequenceIdMatcher.java
+++ b/
src/jalview/analysis/SequenceIdMatcher.java
@@
-117,13
+117,13
@@
public class SequenceIdMatcher
* SequenceI
* @return SequenceI
*/
* SequenceI
* @return SequenceI
*/
- SequenceI findIdMatch(SequenceI seq)
+ public SequenceI findIdMatch(SequenceI seq)
{
SeqIdName nam = new SeqIdName(seq.getName());
return findIdMatch(nam);
}
{
SeqIdName nam = new SeqIdName(seq.getName());
return findIdMatch(nam);
}
- SequenceI findIdMatch(String seqnam)
+ public SequenceI findIdMatch(String seqnam)
{
SeqIdName nam = new SeqIdName(seqnam);
return findIdMatch(nam);
{
SeqIdName nam = new SeqIdName(seqnam);
return findIdMatch(nam);
@@
-139,7
+139,7
@@
public class SequenceIdMatcher
* SequenceI[]
* @return SequenceI[]
*/
* SequenceI[]
* @return SequenceI[]
*/
- SequenceI[] findIdMatch(SequenceI[] seqs)
+ public SequenceI[] findIdMatch(SequenceI[] seqs)
{
SequenceI[] namedseqs = null;
int i = 0;
{
SequenceI[] namedseqs = null;
int i = 0;