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takes into account fullid display
author
amwaterhouse
<Andrew Waterhouse>
Thu, 17 Mar 2005 10:40:18 +0000
(10:40 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Thu, 17 Mar 2005 10:40:18 +0000
(10:40 +0000)
src/jalview/io/HTMLOutput.java
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diff --git
a/src/jalview/io/HTMLOutput.java
b/src/jalview/io/HTMLOutput.java
index
af894e0
..
a6ab087
100755
(executable)
--- a/
src/jalview/io/HTMLOutput.java
+++ b/
src/jalview/io/HTMLOutput.java
@@
-90,7
+90,11
@@
public class HTMLOutput
{
\r
seq = alignment.getSequenceAt(i);
\r
groups = alignment.findAllGroups( seq );
\r
{
\r
seq = alignment.getSequenceAt(i);
\r
groups = alignment.findAllGroups( seq );
\r
- out.println("<tr><td nowrap>"+seq.getDisplayId()+" </td>");
\r
+ if(av.getShowFullId())
\r
+ out.println("<tr><td nowrap>"+seq.getDisplayId()+" </td>");
\r
+ else
\r
+ out.println("<tr><td nowrap>"+seq.getName()+" </td>");
\r
+
\r
\r
\r
for (int res = 0; res < seq.getLength(); res++)
\r
\r
\r
for (int res = 0; res < seq.getLength(); res++)
\r
@@
-172,7
+176,10
@@
public class HTMLOutput
out.println("<tr>");
\r
seq = al.getSequenceAt(s);
\r
groups = al.findAllGroups( seq );
\r
out.println("<tr>");
\r
seq = al.getSequenceAt(s);
\r
groups = al.findAllGroups( seq );
\r
- out.println("<td nowrap>"+seq.getDisplayId()+" </td>");
\r
+ if(av.getShowFullId())
\r
+ out.println("<td nowrap>"+seq.getDisplayId()+" </td>");
\r
+ else
\r
+ out.println("<td nowrap>"+seq.getName()+" </td>");
\r
\r
for (int res = startRes; res < endRes; res++)
\r
{
\r
\r
for (int res = startRes; res < endRes; res++)
\r
{
\r