git://source.jalview.org
/
jalview.git
/ commitdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
| commitdiff |
tree
raw
|
patch
|
inline
| side by side (parent:
2a9b708
)
getTree method added
author
amwaterhouse
<Andrew Waterhouse>
Wed, 13 Apr 2005 16:36:18 +0000
(16:36 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Wed, 13 Apr 2005 16:36:18 +0000
(16:36 +0000)
src/jalview/gui/TreePanel.java
patch
|
blob
|
history
diff --git
a/src/jalview/gui/TreePanel.java
b/src/jalview/gui/TreePanel.java
index
eb0123f
..
9f9e327
100755
(executable)
--- a/
src/jalview/gui/TreePanel.java
+++ b/
src/jalview/gui/TreePanel.java
@@
-29,6
+29,10
@@
public class TreePanel extends GTreePanel
TreeCanvas treeCanvas;
\r
NJTree tree;
\r
\r
TreeCanvas treeCanvas;
\r
NJTree tree;
\r
\r
+ public NJTree getTree()
\r
+ {
\r
+ return tree;
\r
+ }
\r
\r
public TreePanel(AlignViewport av, Vector seqVector, String type, String pwtype, int s, int e)
\r
{
\r
\r
public TreePanel(AlignViewport av, Vector seqVector, String type, String pwtype, int s, int e)
\r
{
\r
@@
-50,7
+54,6
@@
public class TreePanel extends GTreePanel
}
\r
\r
tree = new NJTree(seq, type, pwtype, start, end);
\r
}
\r
\r
tree = new NJTree(seq, type, pwtype, start, end);
\r
- av.setCurrentTree(tree);
\r
\r
treeCanvas = new TreeCanvas(av, tree, scrollPane, longestName);
\r
\r
\r
treeCanvas = new TreeCanvas(av, tree, scrollPane, longestName);
\r
\r
@@
-80,8
+83,6
@@
public class TreePanel extends GTreePanel
}
\r
// This constructor matches sequence names to treenodes and sets up the tree layouts.
\r
tree = new NJTree(seq, newtree);
\r
}
\r
// This constructor matches sequence names to treenodes and sets up the tree layouts.
\r
tree = new NJTree(seq, newtree);
\r
- av.setCurrentTree(tree);
\r
-
\r
\r
tree.reCount(tree.getTopNode());
\r
tree.findHeight(tree.getTopNode());
\r
\r
tree.reCount(tree.getTopNode());
\r
tree.findHeight(tree.getTopNode());
\r