git://source.jalview.org
/
jalview.git
/ commitdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
| commitdiff |
tree
raw
|
patch
|
inline
| side by side (parent:
cc7ce06
)
Applet search by residue index fixed
author
amwaterhouse
<Andrew Waterhouse>
Fri, 2 Sep 2005 08:29:13 +0000
(08:29 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Fri, 2 Sep 2005 08:29:13 +0000
(08:29 +0000)
src/jalview/appletgui/Finder.java
patch
|
blob
|
history
diff --git
a/src/jalview/appletgui/Finder.java
b/src/jalview/appletgui/Finder.java
index
e152506
..
06fc9e1
100755
(executable)
--- a/
src/jalview/appletgui/Finder.java
+++ b/
src/jalview/appletgui/Finder.java
@@
-144,18
+144,18
@@
public class Finder
int res = Integer.parseInt(searchString);
\r
found = true;
\r
\r
int res = Integer.parseInt(searchString);
\r
found = true;
\r
\r
- if (av.getSelectionGroup().getSize() > 0)
\r
+ if (av.getSelectionGroup() == null || av.getSelectionGroup().getSize() < 1)
\r
{
\r
{
\r
- seq = (Sequence) (av.getSelectionGroup().getSequenceAt(0));
\r
+ seq = (Sequence) av.getAlignment().getSequenceAt(0);
\r
}
\r
else
\r
{
\r
}
\r
else
\r
{
\r
- seq = (Sequence) av.getAlignment().getSequenceAt(0);
\r
+ seq = (Sequence) (av.getSelectionGroup().getSequenceAt(0));
\r
}
\r
\r
searchResults.addElement(Integer.toString(av.getAlignment().findIndex(seq)));
\r
}
\r
\r
searchResults.addElement(Integer.toString(av.getAlignment().findIndex(seq)));
\r
- searchResults.addElement(Integer.toString(seq.findIndex(res) - 1));
\r
- searchResults.addElement(Integer.toString(seq.findIndex(res) - 1));
\r
+ searchResults.addElement(String.valueOf(res));
\r
+ searchResults.addElement(String.valueOf(res));
\r
\r
}
\r
catch (NumberFormatException ex)
\r
\r
}
\r
catch (NumberFormatException ex)
\r