{
consensus = new AlignmentAnnotation("","",
new Annotation[1], 0f, 100f, AlignmentAnnotation.BAR_GRAPH);
{
consensus = new AlignmentAnnotation("","",
new Annotation[1], 0f, 100f, AlignmentAnnotation.BAR_GRAPH);
if (conservation == null) {
conservation = new AlignmentAnnotation("","", new Annotation[1], 0f, 11f,
AlignmentAnnotation.BAR_GRAPH);
if (conservation == null) {
conservation = new AlignmentAnnotation("","", new Annotation[1], 0f, 11f,
AlignmentAnnotation.BAR_GRAPH);
conservation.hasText = true;
conservation.autoCalculated = true;
conservation.groupRef = this;
conservation.hasText = true;
conservation.autoCalculated = true;
conservation.groupRef = this;
conservation.label = "Conservation for "+getName();
conservation.description = "Conservation for group "+getName()+" less than " + consPercGaps
+ "% gaps";
conservation.label = "Conservation for "+getName();
conservation.description = "Conservation for group "+getName()+" less than " + consPercGaps
+ "% gaps";