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Conservation etc have autoCalculated flag set true
author
amwaterhouse
<Andrew Waterhouse>
Wed, 24 Jan 2007 17:30:49 +0000
(17:30 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Wed, 24 Jan 2007 17:30:49 +0000
(17:30 +0000)
src/jalview/gui/AlignViewport.java
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diff --git
a/src/jalview/gui/AlignViewport.java
b/src/jalview/gui/AlignViewport.java
index
be7f8f4
..
8b929c7
100755
(executable)
--- a/
src/jalview/gui/AlignViewport.java
+++ b/
src/jalview/gui/AlignViewport.java
@@
-199,6
+199,7
@@
public class AlignViewport
11f,
AlignmentAnnotation.BAR_GRAPH);
conservation.hasText = true;
11f,
AlignmentAnnotation.BAR_GRAPH);
conservation.hasText = true;
+ conservation.autoCalculated = true;
if (Cache.getDefault("SHOW_CONSERVATION", true))
if (Cache.getDefault("SHOW_CONSERVATION", true))
@@
-215,6
+216,7
@@
public class AlignViewport
11f,
AlignmentAnnotation.BAR_GRAPH);
quality.hasText = true;
11f,
AlignmentAnnotation.BAR_GRAPH);
quality.hasText = true;
+ quality.autoCalculated = true;
alignment.addAnnotation(quality);
}
alignment.addAnnotation(quality);
}
@@
-224,6
+226,7
@@
public class AlignViewport
new Annotation[1], 0f, 100f,
AlignmentAnnotation.BAR_GRAPH);
consensus.hasText = true;
new Annotation[1], 0f, 100f,
AlignmentAnnotation.BAR_GRAPH);
consensus.hasText = true;
+ consensus.autoCalculated = true;
if (Cache.getDefault("SHOW_IDENTITY", true))
{
if (Cache.getDefault("SHOW_IDENTITY", true))
{
@@
-1599,7
+1602,7
@@
public class AlignViewport
resetAllColourSchemes();
resetAllColourSchemes();
- alignment.adjustSequenceAnnotations();
+ // alignment.adjustSequenceAnnotations();
}
}