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Readline instead of bit by bit
author
amwaterhouse
<Andrew Waterhouse>
Thu, 27 Jul 2006 07:53:41 +0000
(07:53 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Thu, 27 Jul 2006 07:53:41 +0000
(07:53 +0000)
src/jalview/gui/Jalview2XML.java
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diff --git
a/src/jalview/gui/Jalview2XML.java
b/src/jalview/gui/Jalview2XML.java
index
84e3564
..
300cbd5
100755
(executable)
--- a/
src/jalview/gui/Jalview2XML.java
+++ b/
src/jalview/gui/Jalview2XML.java
@@
-824,14
+824,15
@@
public class Jalview2XML
}
\r
while (!entry.getName().equals(pdbId));
\r
\r
}
\r
while (!entry.getName().equals(pdbId));
\r
\r
- DataInputStream in = new DataInputStream(jin);
\r
+ BufferedReader in = new BufferedReader(new InputStreamReader(jin));
\r
File outFile = File.createTempFile("jalview_pdb", ".txt");
\r
outFile.deleteOnExit();
\r
File outFile = File.createTempFile("jalview_pdb", ".txt");
\r
outFile.deleteOnExit();
\r
- DataOutputStream out = new DataOutputStream(new FileOutputStream(outFile));
\r
- int data;
\r
- while ( (data = in.read()) != -1)
\r
+ PrintWriter out = new PrintWriter(new FileOutputStream(outFile));
\r
+ String data;
\r
+
\r
+ while ( (data = in.readLine()) != null)
\r
{
\r
{
\r
- out.write(data);
\r
+ out.println(data);
\r
}
\r
out.close();
\r
return outFile.getAbsolutePath();
\r
}
\r
out.close();
\r
return outFile.getAbsolutePath();
\r