+ ButtonGroup colours = new ButtonGroup();\r
+ colours.add(noColourmenuItem);\r
+ colours.add(clustalColour);\r
+ colours.add(zappoColour);\r
+ colours.add(taylorColour);\r
+ colours.add(hydrophobicityColour);\r
+ colours.add(helixColour);\r
+ colours.add(strandColour);\r
+ colours.add(turnColour);\r
+ colours.add(buriedColour);\r
+ colours.add(userDefinedColour);\r
+ colours.add(PIDColour);\r
+ colours.add(BLOSUM62Colour);\r
+ colours.add(nucleotideColour);\r
+\r
+ noColourmenuItem.setSelected(true);\r
+ String defaultColour = Preferences.defaultColour;\r
+ if(defaultColour!=null)\r
+ {\r
+ int index = ColourSchemeProperty.getColourIndexFromName(defaultColour);\r
+ switch(index)\r
+ {\r
+ case ColourSchemeProperty.CLUSTAL : clustalColour.setSelected(true); break;\r
+ case ColourSchemeProperty.BLOSUM : BLOSUM62Colour.setSelected(true); break;\r
+ case ColourSchemeProperty.PID : PIDColour.setSelected(true); break;\r
+ case ColourSchemeProperty.ZAPPO : zappoColour.setSelected(true); break;\r
+ case ColourSchemeProperty.HYDROPHOBIC: hydrophobicityColour.setSelected(true); break;\r
+ case ColourSchemeProperty.HELIX: helixColour.setSelected(true); break;\r
+ case ColourSchemeProperty.STRAND: strandColour.setSelected(true); break;\r
+ case ColourSchemeProperty.TURN : turnColour.setSelected(true); break;\r
+ case ColourSchemeProperty.BURIED: buriedColour.setSelected(true); break;\r
+ case ColourSchemeProperty.NUCLEOTIDE: nucleotideColour.setSelected(true); break;\r
+ case ColourSchemeProperty.USER_DEFINED : userDefinedColour.setSelected(true); break;\r
+ }\r
+ }\r