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If colour hasnt been created, make a new one
author
amwaterhouse
<Andrew Waterhouse>
Fri, 28 Jul 2006 13:16:05 +0000
(13:16 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Fri, 28 Jul 2006 13:16:05 +0000
(13:16 +0000)
src/jalview/appletgui/FeatureRenderer.java
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diff --git
a/src/jalview/appletgui/FeatureRenderer.java
b/src/jalview/appletgui/FeatureRenderer.java
index
0f9f393
..
66a9bc2
100755
(executable)
--- a/
src/jalview/appletgui/FeatureRenderer.java
+++ b/
src/jalview/appletgui/FeatureRenderer.java
@@
-318,6
+318,9
@@
public class FeatureRenderer
\r
void findAllFeatures()
\r
{
\r
\r
void findAllFeatures()
\r
{
\r
+ jalview.schemes.UserColourScheme ucs = new
\r
+ jalview.schemes.UserColourScheme();
\r
+
\r
av.featuresDisplayed = new Hashtable();
\r
Vector allfeatures = new Vector();
\r
for (int i = 0; i < av.alignment.getHeight(); i++)
\r
av.featuresDisplayed = new Hashtable();
\r
Vector allfeatures = new Vector();
\r
for (int i = 0; i < av.alignment.getHeight(); i++)
\r
@@
-332,6
+335,14
@@
public class FeatureRenderer
{
\r
if (!av.featuresDisplayed.containsKey(features[index].getType()))
\r
{
\r
{
\r
if (!av.featuresDisplayed.containsKey(features[index].getType()))
\r
{
\r
+ if (getColour(features[index].getType()) == null)
\r
+ {
\r
+ featureColours.put(features[index].getType(),
\r
+ ucs.createColourFromName(features[index].
\r
+ getType()));
\r
+ }
\r
+
\r
+
\r
av.featuresDisplayed.put(features[index].getType(),
\r
new Integer( getColour(features[index].getType()).getRGB()) );
\r
allfeatures.addElement(features[index].getType());
\r
av.featuresDisplayed.put(features[index].getType(),
\r
new Integer( getColour(features[index].getType()).getRGB()) );
\r
allfeatures.addElement(features[index].getType());
\r