- Cache.log.debug("Launched fetcher for coordinate system " +\r
- cs[0].getName());\r
- // Will have to pass any mapping information to the fetcher\r
- //- the start/end for the DBRefEntry may not be the same as the sequence's start/end\r
- \r
- createFeatureFetcher(seq,\r
- dasSource,\r
- uprefs[j]);\r
- break; // only do this for one reference - assume same source will send same features for all IDs\r
+ if (cs.length > 0 && jalview.util.DBRefUtils\r
+ .isDasCoordinateSystem(cs[csIndex].getName(), uprefs[j]))\r
+ {\r
+ Cache.log.debug("Launched fetcher for coordinate system " +\r
+ cs[0].getName());\r
+ // Will have to pass any mapping information to the fetcher\r
+ //- the start/end for the DBRefEntry may not be the same as the sequence's start/end\r
+\r
+ System.out.println(seq.getName() + " " + (seq.getDatasetSequence() == null)\r
+ + " " + dasSource.getUrl());\r
+\r
+ dasCoordSysFound = false;\r
+ createFeatureFetcher(seq,\r
+ dasSource,\r
+ uprefs[j]);\r
+ break; // only do this for one reference - assume same source will send same features for all IDs\r
+ }\r
+ else\r
+ System.out.println("IGNORE " + cs[csIndex].getName());\r