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3479ad0
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dont add new seqs to group
author
amwaterhouse
<Andrew Waterhouse>
Fri, 11 Feb 2005 12:43:31 +0000
(12:43 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Fri, 11 Feb 2005 12:43:31 +0000
(12:43 +0000)
src/jalview/datamodel/Alignment.java
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diff --git
a/src/jalview/datamodel/Alignment.java
b/src/jalview/datamodel/Alignment.java
index
8535d84
..
86d2c0e
100755
(executable)
--- a/
src/jalview/datamodel/Alignment.java
+++ b/
src/jalview/datamodel/Alignment.java
@@
-40,7
+40,6
@@
public class Alignment implements AlignmentI
}
\r
\r
/** Adds a sequence to the alignment. Recalculates maxLength and size.
\r
}
\r
\r
/** Adds a sequence to the alignment. Recalculates maxLength and size.
\r
- * Should put the new sequence in a sequence group!!!
\r
*
\r
* @param snew
\r
*/
\r
*
\r
* @param snew
\r
*/
\r
@@
-55,8
+54,7
@@
public class Alignment implements AlignmentI
}
\r
\r
/** Adds a sequence to the alignment. Recalculates maxLength and size.
\r
}
\r
\r
/** Adds a sequence to the alignment. Recalculates maxLength and size.
\r
- * Should put the new sequence in a sequence group!!!
\r
- *
\r
+ *
\r
* @param snew
\r
*/
\r
public void setSequenceAt(int i,SequenceI snew) {
\r
* @param snew
\r
*/
\r
public void setSequenceAt(int i,SequenceI snew) {
\r
@@
-64,8
+62,6
@@
public class Alignment implements AlignmentI
deleteSequence(oldseq);
\r
\r
sequences.setElementAt(snew,i);
\r
deleteSequence(oldseq);
\r
\r
sequences.setElementAt(snew,i);
\r
-
\r
- ((SequenceGroup)groups.lastElement()).addSequence(snew);
\r
}
\r
\r
public Vector getGroups() {
\r
}
\r
\r
public Vector getGroups() {
\r