- String text = textfield.getText();\r
- text = text.substring(text.lastIndexOf("\t") + 1).trim();\r
- text = jalview.analysis.AlignSeq.extractGaps(\r
- jalview.util.Comparison.GapChars, text);\r
- textfield.setText(text);\r
+ String str = textfield.getText();\r
+ SequenceI[] sequences = FormatAdapter.readFile(str, "Paste", "FASTA");\r
+ if(sequences!=null && sequences.length>0)\r
+ {\r
+ str = jalview.analysis.AlignSeq.extractGaps(\r
+ jalview.util.Comparison.GapChars, sequences[0].getSequence());\r
+\r
+ textfield.setText(str);\r
+ }\r