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JAL-3111 release notes for JAL-27830 JAL-2876 JAL-2567 and JAL-2256
author
Jim Procter
<jprocter@issues.jalview.org>
Wed, 19 Jun 2019 10:01:43 +0000
(11:01 +0100)
committer
Jim Procter
<jprocter@issues.jalview.org>
Wed, 19 Jun 2019 10:01:43 +0000
(11:01 +0100)
help/help/html/releases.html
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diff --git
a/help/help/html/releases.html
b/help/help/html/releases.html
index
f70d2bb
..
7b33149
100755
(executable)
--- a/
help/help/html/releases.html
+++ b/
help/help/html/releases.html
@@
-357,7
+357,11
@@
li:before {
<!-- JAL-2541,JAL-2684 (tests) -->Delete/Cut selection doesn't relocate
sequence features correctly when start of sequence is
removed (Known defect since 2.10)</li>
<!-- JAL-2541,JAL-2684 (tests) -->Delete/Cut selection doesn't relocate
sequence features correctly when start of sequence is
removed (Known defect since 2.10)</li>
- </ul><em>New Known Defects</em>
+ <li>
+ <!-- JAL-2830 -->Inserting gap sequence via the Edit Sequence
+ dialog corrupts dataset sequence
+ </li>
+ </ul><em>New Known Defects</em>
<ul>
<li>
<!-- JAL-2647 -->Input Data menu entry is greyed out when PCA View is restored from a Jalview 2.11 project</li>
<ul>
<li>
<!-- JAL-2647 -->Input Data menu entry is greyed out when PCA View is restored from a Jalview 2.11 project</li>
@@
-372,6
+376,12
@@
li:before {
window after dragging left to select columns to left of visible
region
</li>
window after dragging left to select columns to left of visible
region
</li>
+ <li>
+ <!-- JAL-2876 -->Features coloured according to their description
+ string and thresholded by score in earlier versions of Jalview are
+ not shown as thresholded features in 2.11. To workaround please
+ create a Score filter instead.
+ </li>
</ul>
</td>
</tr>
</ul>
</td>
</tr>
@@
-1458,7
+1468,16
@@
li:before {
<!-- JAL-2589 -->User defined gap colour not shown in
overview when features overlaid on alignment
</li>
<!-- JAL-2589 -->User defined gap colour not shown in
overview when features overlaid on alignment
</li>
- </ul>
+ <li>
+ <!-- JAL-2567 -->Feature settings for different views not
+ recovered correctly from Jalview project file
+ </li>
+ <li>
+ <!-- JAL-2256 -->Feature colours in overview when first opened
+ (automatically via preferences) are different to the main
+ alignment panel
+ </li>
+ </ul>
<em>Data import/export</em>
<ul>
<li>
<em>Data import/export</em>
<ul>
<li>