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authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Mon, 21 Oct 2013 22:10:54 +0000 (22:10 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Mon, 21 Oct 2013 22:10:54 +0000 (22:10 +0000)
forester/ruby/scripts/g.rb patch | blob | history
forester/ruby/scripts/gl.rb patch | blob | history

diff --git a/forester/ruby/scripts/g.rb b/forester/ruby/scripts/g.rb
index a4ccd52..c8e367b 100644 (file)
--- a/forester/ruby/scripts/g.rb
+++ b/forester/ruby/scripts/g.rb
@@ -1,4 +1,4 @@
-File.open( "g" ) do | file |
+File.open( "g.txt" ) do | file |
   while line = file.gets
     if line =~ /^([A-Z0-9]{3,5})/
       puts "/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/" + $1 + ".hmmscan    " + $1
   while line = file.gets
     if line =~ /^([A-Z0-9]{3,5})/
       puts "/home/czmasek/DATA/GENOME_HMMSCAN/CDHIT_095_PFAM270X/" + $1 + ".hmmscan    " + $1
diff --git a/forester/ruby/scripts/gl.rb b/forester/ruby/scripts/gl.rb
index ebb99a9..e4cf9e8 100644 (file)
--- a/forester/ruby/scripts/gl.rb
+++ b/forester/ruby/scripts/gl.rb
@@ -1,4 +1,4 @@
-File.open( "gl.txt" ) do | file |
+File.open( "g.txt" ) do | file |
   while line = file.gets
     if line =~ /^([A-Z0-9]{3,5})/
       puts $1 + "\t" + "/home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/" + $1 + ".fasta"
   while line = file.gets
     if line =~ /^([A-Z0-9]{3,5})/
       puts $1 + "\t" + "/home/czmasek/DATA/SEQUENCES/GENOMES/PROTEIN_PREDICTIONS_CDHIT_095/ALL/" + $1 + ".fasta"