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section and subsection added
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Mon, 13 Feb 2012 22:27:43 +0000 (22:27 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Mon, 13 Feb 2012 22:27:43 +0000 (22:27 +0000)
forester/java/src/org/forester/io/parsers/phyloxml/PhyloXmlUtil.java patch | blob | history

diff --git a/forester/java/src/org/forester/io/parsers/phyloxml/PhyloXmlUtil.java b/forester/java/src/org/forester/io/parsers/phyloxml/PhyloXmlUtil.java
index dddecec..02ba6ea 100644 (file)
--- a/forester/java/src/org/forester/io/parsers/phyloxml/PhyloXmlUtil.java
+++ b/forester/java/src/org/forester/io/parsers/phyloxml/PhyloXmlUtil.java
@@ -100,6 +100,8 @@ public final class PhyloXmlUtil {
         TAXONOMY_RANKS_LIST.add( "subform" );
         TAXONOMY_RANKS_LIST.add( "cultivar" );
         TAXONOMY_RANKS_LIST.add( "strain" );
         TAXONOMY_RANKS_LIST.add( "subform" );
         TAXONOMY_RANKS_LIST.add( "cultivar" );
         TAXONOMY_RANKS_LIST.add( "strain" );
+        TAXONOMY_RANKS_LIST.add( "section" );
+        TAXONOMY_RANKS_LIST.add( "subsection" );
         TAXONOMY_RANKS_LIST.add( UNKNOWN );
         TAXONOMY_RANKS_LIST.add( OTHER );
         // same thing as set:
         TAXONOMY_RANKS_LIST.add( UNKNOWN );
         TAXONOMY_RANKS_LIST.add( OTHER );
         // same thing as set:
@@ -152,6 +154,8 @@ public final class PhyloXmlUtil {
         TAXONOMY_RANKS_SET.add( "subform" );
         TAXONOMY_RANKS_SET.add( "cultivar" );
         TAXONOMY_RANKS_SET.add( "strain" );
         TAXONOMY_RANKS_SET.add( "subform" );
         TAXONOMY_RANKS_SET.add( "cultivar" );
         TAXONOMY_RANKS_SET.add( "strain" );
+        TAXONOMY_RANKS_SET.add( "section" );
+        TAXONOMY_RANKS_SET.add( "subsection" );
         TAXONOMY_RANKS_SET.add( UNKNOWN );
         TAXONOMY_RANKS_SET.add( OTHER );
     };
         TAXONOMY_RANKS_SET.add( UNKNOWN );
         TAXONOMY_RANKS_SET.add( OTHER );
     };