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PCAPanel checks viewport selection
author
amwaterhouse
<Andrew Waterhouse>
Tue, 20 Sep 2005 13:19:33 +0000
(13:19 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Tue, 20 Sep 2005 13:19:33 +0000
(13:19 +0000)
src/jalview/appletgui/PCAPanel.java
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diff --git
a/src/jalview/appletgui/PCAPanel.java
b/src/jalview/appletgui/PCAPanel.java
index
f470ffc
..
399fce8
100755
(executable)
--- a/
src/jalview/appletgui/PCAPanel.java
+++ b/
src/jalview/appletgui/PCAPanel.java
@@
-38,20
+38,19
@@
public class PCAPanel
SequenceI [] seqs;
\r
\r
\r
SequenceI [] seqs;
\r
\r
\r
- public PCAPanel(AlignViewport av, SequenceI[] s)
\r
+ public PCAPanel(AlignViewport av)
\r
{
\r
\r
this.av = av;
\r
{
\r
\r
this.av = av;
\r
- if (av.getSelectionGroup().getSize() > 3)
\r
+ if (av.getSelectionGroup()!=null && av.getSelectionGroup().getSize() > 3)
\r
{
\r
seqs = new Sequence[av.getSelectionGroup().getSize()];
\r
{
\r
seqs = new Sequence[av.getSelectionGroup().getSize()];
\r
- for (int i = 0; i < s.length; i++)
\r
+ for (int i = 0; i < av.getSelectionGroup().getSize(); i++)
\r
{
\r
seqs[i] = av.getSelectionGroup().getSequenceAt(i);
\r
}
\r
}
\r
{
\r
seqs[i] = av.getSelectionGroup().getSequenceAt(i);
\r
}
\r
}
\r
-
\r
- if (seqs == null)
\r
+ else
\r
{
\r
seqs = new Sequence[av.getAlignment().getHeight()];
\r
for (int i = 0; i < av.getAlignment().getHeight(); i++)
\r
{
\r
seqs = new Sequence[av.getAlignment().getHeight()];
\r
for (int i = 0; i < av.getAlignment().getHeight(); i++)
\r