+ mvn clean install
+ java -jar target/benchmarks.jar
+
+ To get output as a json file use instead:
+ java -jar target/benchmarks.jar -rf json
+
+ JSON files can be visualised using the viewer at http://jmh.morethan.io/
+
+ To get help use the standard -h option:
+ java -jar target/benchmarks.jar -h
+
+ More information here:
+ http://openjdk.java.net/projects/code-tools/jmh/
+ http://java-performance.info/jmh/
+
+
+ 5. If you make changes to the jalview code everything will need to be refreshed, by calling:
+ mvn dependency:purge-local-repository -DactTransitively=false -DreResolve=false
+
+ followed by steps 3 and 4 again.