Highlight doesnt use offset

diff --git a/src/MCview/AppletPDBCanvas.java b/src/MCview/AppletPDBCanvas.java
index 1df39fa..4c62b60 100755 (executable)
--- a/src/MCview/AppletPDBCanvas.java
+++ b/src/MCview/AppletPDBCanvas.java
@@ -99,7 +99,7 @@ public class AppletPDBCanvas extends Panel implements MouseListener, MouseMotion
      highlightBond1 = null;\r
      highlightBond2 = null;\r
 \r
-     int index = ii - mainchain.seqstart - mainchain.offset+1;\r
+     int index = ii - mainchain.seqstart;\r
      if(index <0 )\r
        return;\r
 \r

diff --git a/src/MCview/PDBCanvas.java b/src/MCview/PDBCanvas.java
index f0806a8..33dfb8b 100755 (executable)
--- a/src/MCview/PDBCanvas.java
+++ b/src/MCview/PDBCanvas.java
@@ -557,13 +557,13 @@ public class PDBCanvas extends JPanel implements MouseListener, MouseMotionListe
 \r
             if(highlightBond1!=null && highlightBond1==tmpBond)\r
             {\r
-              g.setColor(tmpBond.endCol.brighter().brighter().brighter());\r
+              g.setColor(tmpBond.endCol.brighter().brighter().brighter().brighter());\r
               drawLine(g, xmid, ymid, xend, yend);\r
             }\r
 \r
             if(highlightBond2!=null && highlightBond2==tmpBond)\r
             {\r
-              g.setColor(tmpBond.startCol.brighter().brighter().brighter());\r
+              g.setColor(tmpBond.startCol.brighter().brighter().brighter().brighter());\r
               drawLine(g, xstart, ystart, xmid, ymid);\r
             }\r
 \r
@@ -846,7 +846,8 @@ public class PDBCanvas extends JPanel implements MouseListener, MouseMotionListe
     highlightBond1 = null;\r
     highlightBond2 = null;\r
 \r
-    int index = ii - mainchain.seqstart - mainchain.offset+1;\r
+    int index = ii - mainchain.seqstart;\r
+\r
     if(index <0 )\r
       return;\r
 \r