public AppVarna(SequenceI seq, String strucseq, String struc,
String name, AlignmentPanel ap)
{
- this.ap=ap;
+ this.ap = ap;
ArrayList<RNA> rnaList = new ArrayList<RNA>();
RNA rna1 = new RNA(name);
try
if (_lastRNAhighlighted != null)
{
_lastRNAhighlighted.removeHighlightRegion(_lastHighlight);
- if (vab!=null) {
+ if (vab != null)
+ {
vab.updateSelectedRNA(_lastRNAhighlighted);
}
_lastRNAhighlighted = null;
_lastHighlight = null;
-
+
}
}
}
@Override
public void onSelectionChanged(BaseList arg0, BaseList arg1, BaseList arg2)
{
- // TODO translate selected regions in VARNA to a selection on the alignpanel.
-
+ // TODO translate selected regions in VARNA to a selection on the
+ // alignpanel.
+
}
}