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comment on WORD_SEP values
author
jprocter
<Jim Procter>
Mon, 22 Aug 2005 14:19:25 +0000
(14:19 +0000)
committer
jprocter
<Jim Procter>
Mon, 22 Aug 2005 14:19:25 +0000
(14:19 +0000)
src/jalview/analysis/SequenceIdMatcher.java
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diff --git
a/src/jalview/analysis/SequenceIdMatcher.java
b/src/jalview/analysis/SequenceIdMatcher.java
index
f4f305b
..
9d33996
100755
(executable)
--- a/
src/jalview/analysis/SequenceIdMatcher.java
+++ b/
src/jalview/analysis/SequenceIdMatcher.java
@@
-146,6
+146,8
@@
public class SequenceIdMatcher
/**
\r
* Characters that define the end of a unique sequence ID at
\r
* the beginning of an arbitrary ID string
\r
+ * JBPNote: This is a heuristic that will fail for arbritrarily extended sequence id's
\r
+ * (like portions of an aligned set of repeats from one sequence)
\r
*/
\r
private String WORD_SEP="~. |#\\/<>!\"£$%^*)}[@',?";
\r
\r