protected AlignmentPanel alignPanel;
ScrollThread scrollThread = null;
-
+ String linkImageURL;
+
int offy;
// int width;
this.av = av;
alignPanel = parent;
idCanvas = new IdCanvas(av);
+ linkImageURL = getClass().getResource("/images/link.gif").toString();
setLayout(new BorderLayout());
add(idCanvas, BorderLayout.CENTER);
addMouseListener(this);
// ADD NON POSITIONAL SEQUENCE INFO
SequenceFeature[] features = sequence.getDatasetSequence()
.getSequenceFeatures();
+ SequenceFeature[] tfeat = new SequenceFeature[1];
if (av.isShowNpFeats() && features != null)
{
for (int i = 0; i < features.length; i++)
{
if (features[i].begin == 0 && features[i].end == 0)
{
- tip.append("<br>");
int sz = -tip.length();
- boolean nl=false;
- if (features[i].getFeatureGroup()!=null) { tip.append(features[i].getFeatureGroup()); nl=true;};
- if (features[i].getType()!=null) { tip.append(" "); tip.append(features[i].getType()); nl=true;};
- if (features[i].getDescription()!=null) { tip.append(" "); tip.append(features[i].getDescription()); nl=true;};
- if (features[i].getScore()!=Float.NaN && features[i].getScore()!=0f) { tip.append(" Score = "); tip.append(features[i].getScore()); nl=true;};
- if (features[i].getStatus()!=null && features[i].getStatus().length()>0) { tip.append(" ("); tip.append(features[i].getStatus()); tip.append(")");nl=true;};
- if (nl) {
- sz+=tip.length();
- tip.append("<br>");
- maxWidth = Math.max(maxWidth, sz);
- }
+ tfeat[0] = features[i];
+ SeqPanel.appendFeatures(tip, linkImageURL, 0, tfeat);
+ sz+=tip.length();
+ maxWidth = Math.max(maxWidth, sz);
}
}
}