JAL-2778 Changed local repaint to alignment repaint for fastpaints

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index 3a1dbe8..8d0fefb 100644 (file)
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -874,18 +874,9 @@ public class AlignmentPanel extends GAlignmentPanel implements
   @Override
   public void paintComponent(Graphics g)
   {
-    invalidate();
-
     Dimension d = getIdPanel().getIdCanvas().getPreferredSize();
     idPanelHolder.setPreferredSize(d);
     hscrollFillerPanel.setPreferredSize(new Dimension(d.width, 12));
-    validate();
-
-    /*
-     * set scroll bar positions
-     */
-    ViewportRanges ranges = av.getRanges();
-    setScrollValues(ranges.getStartRes(), ranges.getStartSeq());
   }
 
   /**

diff --git a/src/jalview/gui/AnnotationPanel.java b/src/jalview/gui/AnnotationPanel.java
index abe92bb..0d86b07 100755 (executable)
--- a/src/jalview/gui/AnnotationPanel.java
+++ b/src/jalview/gui/AnnotationPanel.java
@@ -961,7 +961,7 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
       gg.fillRect(0, 0, imgWidth, image.getHeight());
       imageFresh = true;
     }
-
+    
     drawComponent(gg, av.getRanges().getStartRes(),
             av.getRanges().getEndRes() + 1);
     imageFresh = false;
@@ -1014,7 +1014,8 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
     gg.translate(-transX, 0);
 
     fastPaint = true;
-    repaint();
+
+    av.getAlignPanel().alignFrame.repaint();
   }
 
   private volatile boolean lastImageGood = false;

diff --git a/src/jalview/gui/IdCanvas.java b/src/jalview/gui/IdCanvas.java
index ae13444..1ee281a 100755 (executable)
--- a/src/jalview/gui/IdCanvas.java
+++ b/src/jalview/gui/IdCanvas.java
@@ -204,7 +204,8 @@ public class IdCanvas extends JPanel implements ViewportListenerI
     gg.translate(0, -transY);
 
     fastPaint = true;
-    repaint();
+
+    av.getAlignPanel().alignFrame.repaint();
   }
 
   /**
@@ -220,39 +221,39 @@ public class IdCanvas extends JPanel implements ViewportListenerI
 
     g.setColor(Color.white);
     g.fillRect(0, 0, getWidth(), getHeight());
-
+    
     if (fastPaint)
     {
       fastPaint = false;
       g.drawImage(image, 0, 0, this);
-
+    
       return;
     }
-
+    
     int oldHeight = imgHeight;
-
+    
     imgHeight = getHeight();
     imgHeight -= (imgHeight % av.getCharHeight());
-
+    
     if (imgHeight < 1)
     {
       return;
     }
-
+    
     if (oldHeight != imgHeight || image.getWidth(this) != getWidth())
     {
       image = new BufferedImage(getWidth(), imgHeight,
               BufferedImage.TYPE_INT_RGB);
     }
-
+    
     gg = (Graphics2D) image.getGraphics();
-
+    
     // Fill in the background
     gg.setColor(Color.white);
     gg.fillRect(0, 0, getWidth(), imgHeight);
-
+    
     drawIds(av.getRanges().getStartSeq(), av.getRanges().getEndSeq());
-
+    
     g.drawImage(image, 0, 0, this);
   }
 

diff --git a/src/jalview/gui/ScalePanel.java b/src/jalview/gui/ScalePanel.java
index 76611a1..e9cb04f 100755 (executable)
--- a/src/jalview/gui/ScalePanel.java
+++ b/src/jalview/gui/ScalePanel.java
@@ -555,7 +555,7 @@ public class ScalePanel extends JPanel
             || evt.getPropertyName().equals(ViewportRanges.STARTRESANDSEQ))
     {
       // scroll event, repaint panel
-      repaint();
+      av.getAlignPanel().alignFrame.repaint();
     }
   }
 

diff --git a/src/jalview/gui/SeqCanvas.java b/src/jalview/gui/SeqCanvas.java
index 7724592..a717a17 100755 (executable)
--- a/src/jalview/gui/SeqCanvas.java
+++ b/src/jalview/gui/SeqCanvas.java
@@ -337,7 +337,7 @@ public class SeqCanvas extends JComponent implements ViewportListenerI
       drawPanel(gg, startRes, endRes, startSeq, endSeq, 0);
       gg.translate(-transX, -transY);
 
-      repaint();
+      av.getAlignPanel().alignFrame.repaint();
     } finally
     {
       fastpainting = false;
@@ -351,20 +351,20 @@ public class SeqCanvas extends JComponent implements ViewportListenerI
     
     int charHeight = av.getCharHeight();
     int charWidth = av.getCharWidth();
-
+    
     ViewportRanges ranges = av.getRanges();
-
+    
     int width = getWidth();
     int height = getHeight();
-
+    
     width -= (width % charWidth);
     height -= (height % charHeight);
-
+    
     // selectImage is the selection group outline image
     BufferedImage selectImage = drawSelectionGroup(
             ranges.getStartRes(), ranges.getEndRes(),
             ranges.getStartSeq(), ranges.getEndSeq());
-
+    
     if ((img != null) && (fastPaint
             || (getVisibleRect().width != g.getClipBounds().width)
             || (getVisibleRect().height != g.getClipBounds().height)))
@@ -388,16 +388,16 @@ public class SeqCanvas extends JComponent implements ViewportListenerI
         gg = (Graphics2D) img.getGraphics();
         gg.setFont(av.getFont());
       }
-
+    
       if (av.antiAlias)
       {
         gg.setRenderingHint(RenderingHints.KEY_ANTIALIASING,
                 RenderingHints.VALUE_ANTIALIAS_ON);
       }
-
+    
       gg.setColor(Color.white);
       gg.fillRect(0, 0, img.getWidth(), img.getHeight());
-
+    
       if (av.getWrapAlignment())
       {
         drawWrappedPanel(gg, getWidth(), getHeight(), ranges.getStartRes());
@@ -407,7 +407,7 @@ public class SeqCanvas extends JComponent implements ViewportListenerI
         drawPanel(gg, ranges.getStartRes(), ranges.getEndRes(),
                 ranges.getStartSeq(), ranges.getEndSeq(), 0);
       }
-
+    
       // lcimg is a local *copy* of img which we'll draw selectImage on top of
       BufferedImage lcimg = buildLocalImage(selectImage);
       g.drawImage(lcimg, 0, 0, this);