JAL-3026 major update 1/2
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Thu, 26 Jul 2018 15:42:14 +0000 (16:42 +0100)
committerhansonr <hansonr@STO24954W.ad.stolaf.edu>
Sun, 12 Aug 2018 05:17:56 +0000 (00:17 -0500)
- Java2Script 3.2.2 Java 8 ready
- fix for scrollbar returning 3.99999996 instead of 4
- fix for checkboxes too low

- drop in new transpiler
- run eclipsec -clean
- run build-site.xml

191 files changed:
src/jalview/gui/AnnotationPanel.java
src/jalview/gui/ScalePanel.java
srcjar_unused/README_SWINGJS.txt [moved from srcjar2/README_SWINGJS.txt with 100% similarity]
srcjar_unused/org/apache/log4j/Appender.java [moved from srcjar2/org/apache/log4j/Appender.java with 100% similarity]
srcjar_unused/org/apache/log4j/AppenderSkeleton.java [moved from srcjar2/org/apache/log4j/AppenderSkeleton.java with 100% similarity]
srcjar_unused/org/apache/log4j/AsyncAppender.java [moved from srcjar2/org/apache/log4j/AsyncAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/BasicConfigurator.java [moved from srcjar2/org/apache/log4j/BasicConfigurator.java with 100% similarity]
srcjar_unused/org/apache/log4j/Category.java [moved from srcjar2/org/apache/log4j/Category.java with 100% similarity]
srcjar_unused/org/apache/log4j/CategoryKey.java [moved from srcjar2/org/apache/log4j/CategoryKey.java with 100% similarity]
srcjar_unused/org/apache/log4j/ConsoleAppender.java [moved from srcjar2/org/apache/log4j/ConsoleAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/DailyRollingFileAppender.java [moved from srcjar2/org/apache/log4j/DailyRollingFileAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/DefaultCategoryFactory.java [moved from srcjar2/org/apache/log4j/DefaultCategoryFactory.java with 100% similarity]
srcjar_unused/org/apache/log4j/DefaultThrowableRenderer.java [moved from srcjar2/org/apache/log4j/DefaultThrowableRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/Dispatcher.java [moved from srcjar2/org/apache/log4j/Dispatcher.java with 100% similarity]
srcjar_unused/org/apache/log4j/EnhancedPatternLayout.java [moved from srcjar2/org/apache/log4j/EnhancedPatternLayout.java with 100% similarity]
srcjar_unused/org/apache/log4j/EnhancedThrowableRenderer.java [moved from srcjar2/org/apache/log4j/EnhancedThrowableRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/FileAppender.java [moved from srcjar2/org/apache/log4j/FileAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/HTMLLayout.java [moved from srcjar2/org/apache/log4j/HTMLLayout.java with 100% similarity]
srcjar_unused/org/apache/log4j/Hierarchy.java [moved from srcjar2/org/apache/log4j/Hierarchy.java with 100% similarity]
srcjar_unused/org/apache/log4j/Layout.java [moved from srcjar2/org/apache/log4j/Layout.java with 100% similarity]
srcjar_unused/org/apache/log4j/Level.java [moved from srcjar2/org/apache/log4j/Level.java with 100% similarity]
srcjar_unused/org/apache/log4j/LogMF.java [moved from srcjar2/org/apache/log4j/LogMF.java with 100% similarity]
srcjar_unused/org/apache/log4j/LogManager.java [moved from srcjar2/org/apache/log4j/LogManager.java with 100% similarity]
srcjar_unused/org/apache/log4j/LogSF.java [moved from srcjar2/org/apache/log4j/LogSF.java with 100% similarity]
srcjar_unused/org/apache/log4j/LogXF.java [moved from srcjar2/org/apache/log4j/LogXF.java with 100% similarity]
srcjar_unused/org/apache/log4j/Logger.java [moved from srcjar2/org/apache/log4j/Logger.java with 100% similarity]
srcjar_unused/org/apache/log4j/MDC.java [moved from srcjar2/org/apache/log4j/MDC.java with 100% similarity]
srcjar_unused/org/apache/log4j/NDC.java [moved from srcjar2/org/apache/log4j/NDC.java with 100% similarity]
srcjar_unused/org/apache/log4j/PatternLayout.java [moved from srcjar2/org/apache/log4j/PatternLayout.java with 100% similarity]
srcjar_unused/org/apache/log4j/Priority.java [moved from srcjar2/org/apache/log4j/Priority.java with 100% similarity]
srcjar_unused/org/apache/log4j/PropertyConfigurator.java [moved from srcjar2/org/apache/log4j/PropertyConfigurator.java with 100% similarity]
srcjar_unused/org/apache/log4j/ProvisionNode.java [moved from srcjar2/org/apache/log4j/ProvisionNode.java with 100% similarity]
srcjar_unused/org/apache/log4j/README_SWINGJS.txt [moved from srcjar2/org/apache/log4j/README_SWINGJS.txt with 100% similarity]
srcjar_unused/org/apache/log4j/RollingFileAppender.java [moved from srcjar2/org/apache/log4j/RollingFileAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/SimpleLayout.java [moved from srcjar2/org/apache/log4j/SimpleLayout.java with 100% similarity]
srcjar_unused/org/apache/log4j/TTCCLayout.java [moved from srcjar2/org/apache/log4j/TTCCLayout.java with 100% similarity]
srcjar_unused/org/apache/log4j/WriterAppender.java [moved from srcjar2/org/apache/log4j/WriterAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/config/PropertyGetter.java [moved from srcjar2/org/apache/log4j/config/PropertyGetter.java with 100% similarity]
srcjar_unused/org/apache/log4j/config/PropertyPrinter.java [moved from srcjar2/org/apache/log4j/config/PropertyPrinter.java with 100% similarity]
srcjar_unused/org/apache/log4j/config/PropertySetter.java [moved from srcjar2/org/apache/log4j/config/PropertySetter.java with 100% similarity]
srcjar_unused/org/apache/log4j/config/PropertySetterException.java [moved from srcjar2/org/apache/log4j/config/PropertySetterException.java with 100% similarity]
srcjar_unused/org/apache/log4j/config/package.html [moved from srcjar2/org/apache/log4j/config/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/AbsoluteTimeDateFormat.java [moved from srcjar2/org/apache/log4j/helpers/AbsoluteTimeDateFormat.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/AppenderAttachableImpl.java [moved from srcjar2/org/apache/log4j/helpers/AppenderAttachableImpl.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/BoundedFIFO.java [moved from srcjar2/org/apache/log4j/helpers/BoundedFIFO.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/CountingQuietWriter.java [moved from srcjar2/org/apache/log4j/helpers/CountingQuietWriter.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/CyclicBuffer.java [moved from srcjar2/org/apache/log4j/helpers/CyclicBuffer.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/DateLayout.java [moved from srcjar2/org/apache/log4j/helpers/DateLayout.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/DateTimeDateFormat.java [moved from srcjar2/org/apache/log4j/helpers/DateTimeDateFormat.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/FileWatchdog.java [moved from srcjar2/org/apache/log4j/helpers/FileWatchdog.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/FormattingInfo.java [moved from srcjar2/org/apache/log4j/helpers/FormattingInfo.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/ISO8601DateFormat.java [moved from srcjar2/org/apache/log4j/helpers/ISO8601DateFormat.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/Loader.java [moved from srcjar2/org/apache/log4j/helpers/Loader.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/LogLog.java [moved from srcjar2/org/apache/log4j/helpers/LogLog.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/MDCKeySetExtractor.java [moved from srcjar2/org/apache/log4j/helpers/MDCKeySetExtractor.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/NullEnumeration.java [moved from srcjar2/org/apache/log4j/helpers/NullEnumeration.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/OnlyOnceErrorHandler.java [moved from srcjar2/org/apache/log4j/helpers/OnlyOnceErrorHandler.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/OptionConverter.java [moved from srcjar2/org/apache/log4j/helpers/OptionConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/PatternConverter.java [moved from srcjar2/org/apache/log4j/helpers/PatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/PatternParser.java [moved from srcjar2/org/apache/log4j/helpers/PatternParser.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/QuietWriter.java [moved from srcjar2/org/apache/log4j/helpers/QuietWriter.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/RelativeTimeDateFormat.java [moved from srcjar2/org/apache/log4j/helpers/RelativeTimeDateFormat.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/SyslogQuietWriter.java [moved from srcjar2/org/apache/log4j/helpers/SyslogQuietWriter.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/SyslogWriter.java [moved from srcjar2/org/apache/log4j/helpers/SyslogWriter.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/ThreadLocalMap.java [moved from srcjar2/org/apache/log4j/helpers/ThreadLocalMap.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/Transform.java [moved from srcjar2/org/apache/log4j/helpers/Transform.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/UtilLoggingLevel.java [moved from srcjar2/org/apache/log4j/helpers/UtilLoggingLevel.java with 100% similarity]
srcjar_unused/org/apache/log4j/helpers/package.html [moved from srcjar2/org/apache/log4j/helpers/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/jdbc/JDBCAppender.java [moved from srcjar2/org/apache/log4j/jdbc/JDBCAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/jdbc/package.html [moved from srcjar2/org/apache/log4j/jdbc/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/AbstractDynamicMBean.java [moved from srcjar2/org/apache/log4j/jmx/AbstractDynamicMBean.java with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/Agent.java [moved from srcjar2/org/apache/log4j/jmx/Agent.java with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/AppenderDynamicMBean.java [moved from srcjar2/org/apache/log4j/jmx/AppenderDynamicMBean.java with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/HierarchyDynamicMBean.java [moved from srcjar2/org/apache/log4j/jmx/HierarchyDynamicMBean.java with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/LayoutDynamicMBean.java [moved from srcjar2/org/apache/log4j/jmx/LayoutDynamicMBean.java with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/LoggerDynamicMBean.java [moved from srcjar2/org/apache/log4j/jmx/LoggerDynamicMBean.java with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/MethodUnion.java [moved from srcjar2/org/apache/log4j/jmx/MethodUnion.java with 100% similarity]
srcjar_unused/org/apache/log4j/jmx/package.html [moved from srcjar2/org/apache/log4j/jmx/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/net/JMSAppender.java [moved from srcjar2/org/apache/log4j/net/JMSAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/JMSSink.java [moved from srcjar2/org/apache/log4j/net/JMSSink.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/SMTPAppender.java [moved from srcjar2/org/apache/log4j/net/SMTPAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/SimpleSocketServer.java [moved from srcjar2/org/apache/log4j/net/SimpleSocketServer.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/SocketAppender.java [moved from srcjar2/org/apache/log4j/net/SocketAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/SocketHubAppender.java [moved from srcjar2/org/apache/log4j/net/SocketHubAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/SocketNode.java [moved from srcjar2/org/apache/log4j/net/SocketNode.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/SocketServer.java [moved from srcjar2/org/apache/log4j/net/SocketServer.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/SyslogAppender.java [moved from srcjar2/org/apache/log4j/net/SyslogAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/TelnetAppender.java [moved from srcjar2/org/apache/log4j/net/TelnetAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/ZeroConfSupport.java [moved from srcjar2/org/apache/log4j/net/ZeroConfSupport.java with 100% similarity]
srcjar_unused/org/apache/log4j/net/package.html [moved from srcjar2/org/apache/log4j/net/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/nt/NTEventLogAppender.java [moved from srcjar2/org/apache/log4j/nt/NTEventLogAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/nt/package.html [moved from srcjar2/org/apache/log4j/nt/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/or/DefaultRenderer.java [moved from srcjar2/org/apache/log4j/or/DefaultRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/or/ObjectRenderer.java [moved from srcjar2/org/apache/log4j/or/ObjectRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/or/RendererMap.java [moved from srcjar2/org/apache/log4j/or/RendererMap.java with 100% similarity]
srcjar_unused/org/apache/log4j/or/ThreadGroupRenderer.java [moved from srcjar2/org/apache/log4j/or/ThreadGroupRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/or/jms/MessageRenderer.java [moved from srcjar2/org/apache/log4j/or/jms/MessageRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/or/jms/package.html [moved from srcjar2/org/apache/log4j/or/jms/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/or/package.html [moved from srcjar2/org/apache/log4j/or/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/or/sax/AttributesRenderer.java [moved from srcjar2/org/apache/log4j/or/sax/AttributesRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/or/sax/package.html [moved from srcjar2/org/apache/log4j/or/sax/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/package.html [moved from srcjar2/org/apache/log4j/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/BridgePatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/BridgePatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/BridgePatternParser.java [moved from srcjar2/org/apache/log4j/pattern/BridgePatternParser.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/CachedDateFormat.java [moved from srcjar2/org/apache/log4j/pattern/CachedDateFormat.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/ClassNamePatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/ClassNamePatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/DatePatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/DatePatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/FileDatePatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/FileDatePatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/FileLocationPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/FileLocationPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/FormattingInfo.java [moved from srcjar2/org/apache/log4j/pattern/FormattingInfo.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/FullLocationPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/FullLocationPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/IntegerPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/IntegerPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/LevelPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/LevelPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/LineLocationPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/LineLocationPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/LineSeparatorPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/LineSeparatorPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/LiteralPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/LiteralPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/LogEvent.java [moved from srcjar2/org/apache/log4j/pattern/LogEvent.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/LoggerPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/LoggerPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/LoggingEventPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/LoggingEventPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/MessagePatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/MessagePatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/MethodLocationPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/MethodLocationPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/NDCPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/NDCPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/NameAbbreviator.java [moved from srcjar2/org/apache/log4j/pattern/NameAbbreviator.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/NamePatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/NamePatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/PatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/PatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/PatternParser.java [moved from srcjar2/org/apache/log4j/pattern/PatternParser.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/PropertiesPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/PropertiesPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/RelativeTimePatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/RelativeTimePatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/SequenceNumberPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/SequenceNumberPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/ThreadPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/ThreadPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/ThrowableInformationPatternConverter.java [moved from srcjar2/org/apache/log4j/pattern/ThrowableInformationPatternConverter.java with 100% similarity]
srcjar_unused/org/apache/log4j/pattern/package.html [moved from srcjar2/org/apache/log4j/pattern/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/rewrite/MapRewritePolicy.java [moved from srcjar2/org/apache/log4j/rewrite/MapRewritePolicy.java with 100% similarity]
srcjar_unused/org/apache/log4j/rewrite/PropertyRewritePolicy.java [moved from srcjar2/org/apache/log4j/rewrite/PropertyRewritePolicy.java with 100% similarity]
srcjar_unused/org/apache/log4j/rewrite/ReflectionRewritePolicy.java [moved from srcjar2/org/apache/log4j/rewrite/ReflectionRewritePolicy.java with 100% similarity]
srcjar_unused/org/apache/log4j/rewrite/RewriteAppender.java [moved from srcjar2/org/apache/log4j/rewrite/RewriteAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/rewrite/RewritePolicy.java [moved from srcjar2/org/apache/log4j/rewrite/RewritePolicy.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/AppenderAttachable.java [moved from srcjar2/org/apache/log4j/spi/AppenderAttachable.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/Configurator.java [moved from srcjar2/org/apache/log4j/spi/Configurator.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/DefaultRepositorySelector.java [moved from srcjar2/org/apache/log4j/spi/DefaultRepositorySelector.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/ErrorCode.java [moved from srcjar2/org/apache/log4j/spi/ErrorCode.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/ErrorHandler.java [moved from srcjar2/org/apache/log4j/spi/ErrorHandler.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/Filter.java [moved from srcjar2/org/apache/log4j/spi/Filter.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/HierarchyEventListener.java [moved from srcjar2/org/apache/log4j/spi/HierarchyEventListener.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/LocationInfo.java [moved from srcjar2/org/apache/log4j/spi/LocationInfo.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/LoggerFactory.java [moved from srcjar2/org/apache/log4j/spi/LoggerFactory.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/LoggerRepository.java [moved from srcjar2/org/apache/log4j/spi/LoggerRepository.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/LoggingEvent.java [moved from srcjar2/org/apache/log4j/spi/LoggingEvent.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/NOPLogger.java [moved from srcjar2/org/apache/log4j/spi/NOPLogger.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/NOPLoggerRepository.java [moved from srcjar2/org/apache/log4j/spi/NOPLoggerRepository.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/NullWriter.java [moved from srcjar2/org/apache/log4j/spi/NullWriter.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/OptionHandler.java [moved from srcjar2/org/apache/log4j/spi/OptionHandler.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/RendererSupport.java [moved from srcjar2/org/apache/log4j/spi/RendererSupport.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/RepositorySelector.java [moved from srcjar2/org/apache/log4j/spi/RepositorySelector.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/RootCategory.java [moved from srcjar2/org/apache/log4j/spi/RootCategory.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/RootLogger.java [moved from srcjar2/org/apache/log4j/spi/RootLogger.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/ThrowableInformation.java [moved from srcjar2/org/apache/log4j/spi/ThrowableInformation.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/ThrowableRenderer.java [moved from srcjar2/org/apache/log4j/spi/ThrowableRenderer.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/ThrowableRendererSupport.java [moved from srcjar2/org/apache/log4j/spi/ThrowableRendererSupport.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/TriggeringEventEvaluator.java [moved from srcjar2/org/apache/log4j/spi/TriggeringEventEvaluator.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/VectorWriter.java [moved from srcjar2/org/apache/log4j/spi/VectorWriter.java with 100% similarity]
srcjar_unused/org/apache/log4j/spi/package.html [moved from srcjar2/org/apache/log4j/spi/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/varia/DenyAllFilter.java [moved from srcjar2/org/apache/log4j/varia/DenyAllFilter.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/ExternallyRolledFileAppender.java [moved from srcjar2/org/apache/log4j/varia/ExternallyRolledFileAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/FallbackErrorHandler.java [moved from srcjar2/org/apache/log4j/varia/FallbackErrorHandler.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/LevelMatchFilter.java [moved from srcjar2/org/apache/log4j/varia/LevelMatchFilter.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/LevelRangeFilter.java [moved from srcjar2/org/apache/log4j/varia/LevelRangeFilter.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/NullAppender.java [moved from srcjar2/org/apache/log4j/varia/NullAppender.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/ReloadingPropertyConfigurator.java [moved from srcjar2/org/apache/log4j/varia/ReloadingPropertyConfigurator.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/Roller.java [moved from srcjar2/org/apache/log4j/varia/Roller.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/StringMatchFilter.java [moved from srcjar2/org/apache/log4j/varia/StringMatchFilter.java with 100% similarity]
srcjar_unused/org/apache/log4j/varia/package.html [moved from srcjar2/org/apache/log4j/varia/package.html with 100% similarity]
srcjar_unused/org/apache/log4j/xml/DOMConfigurator.java [moved from srcjar2/org/apache/log4j/xml/DOMConfigurator.java with 100% similarity]
srcjar_unused/org/apache/log4j/xml/Log4jEntityResolver.java [moved from srcjar2/org/apache/log4j/xml/Log4jEntityResolver.java with 100% similarity]
srcjar_unused/org/apache/log4j/xml/SAXErrorHandler.java [moved from srcjar2/org/apache/log4j/xml/SAXErrorHandler.java with 100% similarity]
srcjar_unused/org/apache/log4j/xml/UnrecognizedElementHandler.java [moved from srcjar2/org/apache/log4j/xml/UnrecognizedElementHandler.java with 100% similarity]
srcjar_unused/org/apache/log4j/xml/XMLLayout.java [moved from srcjar2/org/apache/log4j/xml/XMLLayout.java with 100% similarity]
srcjar_unused/org/apache/log4j/xml/package.html [moved from srcjar2/org/apache/log4j/xml/package.html with 100% similarity]
srcjar_unused/org/json/simple/ItemList.java [moved from srcjar2/org/json/simple/ItemList.java with 100% similarity]
srcjar_unused/org/json/simple/JSONArray.java [moved from srcjar2/org/json/simple/JSONArray.java with 100% similarity]
srcjar_unused/org/json/simple/JSONAware.java [moved from srcjar2/org/json/simple/JSONAware.java with 100% similarity]
srcjar_unused/org/json/simple/JSONObject.java [moved from srcjar2/org/json/simple/JSONObject.java with 100% similarity]
srcjar_unused/org/json/simple/JSONStreamAware.java [moved from srcjar2/org/json/simple/JSONStreamAware.java with 100% similarity]
srcjar_unused/org/json/simple/JSONValue.java [moved from srcjar2/org/json/simple/JSONValue.java with 100% similarity]
srcjar_unused/org/json/simple/README.txt [moved from srcjar2/org/json/simple/README.txt with 100% similarity]
srcjar_unused/org/json/simple/parser/ContainerFactory.java [moved from srcjar2/org/json/simple/parser/ContainerFactory.java with 100% similarity]
srcjar_unused/org/json/simple/parser/ContentHandler.java [moved from srcjar2/org/json/simple/parser/ContentHandler.java with 100% similarity]
srcjar_unused/org/json/simple/parser/JSONParser.java [moved from srcjar2/org/json/simple/parser/JSONParser.java with 100% similarity]
srcjar_unused/org/json/simple/parser/ParseException.java [moved from srcjar2/org/json/simple/parser/ParseException.java with 100% similarity]
srcjar_unused/org/json/simple/parser/Yylex.java [moved from srcjar2/org/json/simple/parser/Yylex.java with 100% similarity]
srcjar_unused/org/json/simple/parser/Yytoken.java [moved from srcjar2/org/json/simple/parser/Yytoken.java with 100% similarity]

index 822c6d2..1460985 100755 (executable)
@@ -654,6 +654,7 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
   @Override
   public void mouseEntered(MouseEvent evt)
   {
+    this.mouseDragging = false;
     ap.getScalePanel().mouseEntered(evt);
   }
 
index 6a44d06..8771119 100755 (executable)
@@ -354,6 +354,7 @@ public class ScalePanel extends JPanel
   {
     if (mouseDragging)
     {
+      mouseDragging = false;
       ap.getSeqPanel().stopScrolling();
     }
   }