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JAL-2416 test updated for reinstatement of '*' row/column in blosum62
author
gmungoc
<g.m.carstairs@dundee.ac.uk>
Mon, 10 Apr 2017 14:49:05 +0000
(15:49 +0100)
committer
gmungoc
<g.m.carstairs@dundee.ac.uk>
Mon, 10 Apr 2017 14:49:05 +0000
(15:49 +0100)
test/jalview/analysis/AlignSeqTest.java
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diff --git
a/test/jalview/analysis/AlignSeqTest.java
b/test/jalview/analysis/AlignSeqTest.java
index
b9e866d
..
837e970
100644
(file)
--- a/
test/jalview/analysis/AlignSeqTest.java
+++ b/
test/jalview/analysis/AlignSeqTest.java
@@
-70,8
+70,8
@@
public class AlignSeqTest
{
AlignSeq as = new AlignSeq(new Sequence("s1", "PFY"), new Sequence(
"s2", "RQW"), AlignSeq.PEP);
- int[] expected = new int[] { 0, 0, 1, 1, 2, 2, 21, 21, 22, 22, -1, -1,
- -1, 23, -1 };
+ int[] expected = new int[] { 0, 0, 1, 1, 2, 2, 21, 21, 22, 22, -1, 23,
+ -1, -1, -1 };
String s = "aArRnNzZxX *.-?";
assertArrayEquals(expected, as.indexEncode(s));
}