JAL-957 reinstate the PDBfile parameter

diff --git a/examples-jbake/templates/macros.ftl b/examples-jbake/templates/macros.ftl
index 47d031b..2a24008 100644 (file)
--- a/examples-jbake/templates/macros.ftl
+++ b/examples-jbake/templates/macros.ftl
@@ -1,4 +1,4 @@
-<#assign appparams = [ "file","features","treeFile","userDefinedColour","sortByTree","showSequenceLogo","showGroupConsensus","showFullId","linkLabel_1","linkUrl_1","linkUrl_2","linkLabel_2","windowHeight","windowWidth","showFeatureSettings","wrap","showAnnotation","defaultColour","embedded", "debug" ] />
+<#assign appparams = [ "file","features","treeFile","userDefinedColour","sortByTree","showSequenceLogo","showGroupConsensus","showFullId","linkLabel_1","linkUrl_1","linkUrl_2","linkLabel_2","windowHeight","windowWidth","showFeatureSettings","wrap","showAnnotation","defaultColour","embedded", "debug", "PDBfile" ] />
 
 
 <#macro jvlitebutton appjar params prots=true width=140 height=35>

diff --git a/examples/applets.html b/examples/applets.html
index de31d6b..05a50ae 100755 (executable)
--- a/examples/applets.html
+++ b/examples/applets.html
@@ -248,6 +248,7 @@ Try out JalviewLite by pressing one of the buttons below.<br/>
 <param name="wrap" value="true"/>
 <param name="showAnnotation" value="false"/>
 <param name="defaultColour" value="Strand Propensity"/>
+<param name="PDBfile" value="1gaq.txt FER1_MAIZE"/>
    <param name="linkLabel_1" value="Uniprot"/>
    <param name="linkUrl_1"
      value="http://www.uniprot.org/uniprot/$SEQUENCE_ID$"/>

diff --git a/examples/u_applets.html b/examples/u_applets.html
index 76e41d8..f49c38a 100644 (file)
--- a/examples/u_applets.html
+++ b/examples/u_applets.html
@@ -245,6 +245,7 @@ Try out JalviewLite by pressing one of the buttons below.<br/>
 <param name="wrap" value="true"/>
 <param name="showAnnotation" value="false"/>
 <param name="defaultColour" value="Strand Propensity"/>
+<param name="PDBfile" value="1gaq.txt FER1_MAIZE"/>
    <param name="linkLabel_1" value="Uniprot"/>
    <param name="linkUrl_1"
      value="http://www.uniprot.org/uniprot/$SEQUENCE_ID$"/>