JAL-4004 remove stray empty h3 headers

diff --git a/help/markdown/releases/release-2_10_2b1.md b/help/markdown/releases/release-2_10_2b1.md
index d066724..e659bfc 100644 (file)
--- a/help/markdown/releases/release-2_10_2b1.md
+++ b/help/markdown/releases/release-2_10_2b1.md
@@ -8,7 +8,6 @@ date: 2017-09-07
 
 
 
-###
   - <!-- JAL-2588 -->  Show gaps in overview window by colouring in grey (sequences used to be coloured grey, and gaps were white)
   - <!-- JAL-2588,JAL-2527 -->  Overview tab in Jalview Desktop Preferences
   - <!-- JAL-2587 -->  Overview updates immediately on increase in size and progress bar shown as higher resolution overview is recalculated
@@ -18,7 +17,6 @@ date: 2017-09-07
 
 
 
-###
   - <!-- JAL-2664 -->  Overview window redraws every hidden column region row by row
   - <!-- JAL-2681 -->  duplicate protein sequences shown after retrieving Ensembl crossrefs for sequences from Uniprot
   - <!-- JAL-2603 -->  Overview window throws NPE if show boxes format setting is unticked

diff --git a/help/markdown/releases/release-2_10_3.md b/help/markdown/releases/release-2_10_3.md
index 64b1f95..c3ba109 100644 (file)
--- a/help/markdown/releases/release-2_10_3.md
+++ b/help/markdown/releases/release-2_10_3.md
@@ -8,7 +8,6 @@ date: 2017-11-17
 
 
 
-###
   - <!-- JAL-2446 -->  Faster and more efficient management and rendering of sequence features
   - <!-- JAL 2523-->  More reliable Ensembl fetching with HTTP 429 rate limit request hander
   - <!-- JAL-2773 -->  Structure views don't get updated unless their colours have changed

diff --git a/help/markdown/releases/release-2_10_4.md b/help/markdown/releases/release-2_10_4.md
index ad0c592..0c0aff8 100644 (file)
--- a/help/markdown/releases/release-2_10_4.md
+++ b/help/markdown/releases/release-2_10_4.md
@@ -8,7 +8,6 @@ date: 2018-05-10
 
 
 
-###
   - <!-- JAL-1847 JAL-2944 -->  New Structure Chooser control for disabling automatic superposition of multiple structures and open structures in existing views
   - <!-- JAL-984 -->  Mouse cursor changes to indicate Sequence ID and annotation area margins can be click-dragged to adjust them.
   - <!-- JAL-2885 -->  Jalview uses HTTPS for Uniprot, Xfam and Ensembl services

diff --git a/help/markdown/releases/release-2_10_4b1.md b/help/markdown/releases/release-2_10_4b1.md
index 824a70a..e4a463b 100644 (file)
--- a/help/markdown/releases/release-2_10_4b1.md
+++ b/help/markdown/releases/release-2_10_4b1.md
@@ -8,7 +8,6 @@ date: 2018-06-07
 
 
 
-###
   - <!-- JAL-2920 -->  Use HGVS nomenclature for variant annotation retrieved from Uniprot
   - <!-- JAL-1460 -->  Windows File Shortcuts can be dragged onto the Jalview Desktop
 
@@ -17,7 +16,6 @@ date: 2018-06-07
 
 
 
-###
   - <!-- JAL-3017 -->  Cannot import features with multiple variant elements (blocks import of some Uniprot records)
   - <!-- JAL-2997 -->  Clustal files with sequence positions in right-hand column parsed correctly
   - <!-- JAL-2991 -->  Wrap view - export to SVG - IDs shown but not alignment area in exported graphic

diff --git a/help/markdown/releases/release-2_10_5.md b/help/markdown/releases/release-2_10_5.md
index 45133bd..52487e0 100644 (file)
--- a/help/markdown/releases/release-2_10_5.md
+++ b/help/markdown/releases/release-2_10_5.md
@@ -8,7 +8,6 @@ date: 2018-09-10
 
 
 
-###
   - <!-- JAL-3101 -->  Default memory for Jalview webstart and InstallAnywhere increased to 1G.
   - <!-- JAL-247 -->  Hidden sequence markers and representative sequence bolding included when exporting alignment as EPS, SVG, PNG or HTML. *Display is configured via the Format menu, or for command-line use via a Jalview properties file.*
   - <!-- JAL-3076 -->  Ensembl client updated to Version 7 REST API and sequence data now imported as JSON.
@@ -23,7 +22,6 @@ date: 2018-09-10
 
 
 
-###
   - <!-- JAL-3104 -->  Poorly scaled bar in quality annotation row shown in Feredoxin Structure alignment view of example alignment.
   - <!-- JAL-2854 -->  Annotation obscures sequences if lots of annotation displayed.
   - <!-- JAL-3107 -->  Group conservation/consensus not shown for newly created group when 'Apply to all groups' selected

diff --git a/help/markdown/releases/temp b/help/markdown/releases/temp
new file mode 100644 (file)
index 0000000..52487e0
--- /dev/null
+++ b/help/markdown/releases/temp
@@ -0,0 +1,41 @@
+---
+channel: release
+version: 2.10.5
+date: 2018-09-10
+---
+
+## New Features
+
+
+
+  - <!-- JAL-3101 -->  Default memory for Jalview webstart and InstallAnywhere increased to 1G.
+  - <!-- JAL-247 -->  Hidden sequence markers and representative sequence bolding included when exporting alignment as EPS, SVG, PNG or HTML. *Display is configured via the Format menu, or for command-line use via a Jalview properties file.*
+  - <!-- JAL-3076 -->  Ensembl client updated to Version 7 REST API and sequence data now imported as JSON.
+  - <!-- JAL-3065 -->  Change in recommended way of starting Jalview via a Java command line: add jars in lib directory to CLASSPATH, rather than via the deprecated java.ext.dirs property.
+
+
+### Development
+  - <!-- JAL-3047 -->  Support added to execute test suite instrumented with [Open Clover](http://openclover.org/)
+
+
+## Issues Resolved
+
+
+
+  - <!-- JAL-3104 -->  Poorly scaled bar in quality annotation row shown in Feredoxin Structure alignment view of example alignment.
+  - <!-- JAL-2854 -->  Annotation obscures sequences if lots of annotation displayed.
+  - <!-- JAL-3107 -->  Group conservation/consensus not shown for newly created group when 'Apply to all groups' selected
+  - <!-- JAL-3087 -->  Corrupted display when switching to wrapped mode when sequence panel's vertical scrollbar is visible.
+  - <!-- JAL-3003 -->  Alignment is black in exported EPS file when sequences are selected in exported view.
+  - <!-- JAL-3059 -->  Groups with different coloured borders aren't rendered with correct colour.
+  - <!-- JAL-3092 -->  Jalview could hang when importing certain types of knotted RNA secondary structure.
+  - <!-- JAL-3095 -->  Sequence highlight and selection in trimmed VARNA 2D structure is incorrect for sequences that do not start at 1.
+  - <!-- JAL-3061 -->  '.' inserted into RNA secondary structure annotation when columns are inserted into an alignment, and when exporting as Stockholm flatfile.
+  - <!-- JAL-3053 -->  Jalview annotation rows containing upper and lower-case 'E' and 'H' do not automatically get treated as RNA secondary structure.
+  - <!-- JAL-3106 -->  .jvp should be used as default extension (not .jar) when saving a Jalview project file.
+  - <!-- JAL-3105 -->  Mac Users: closing a window correctly transfers focus to previous window on OSX
+
+
+### Java 10 Issues Resolved
+  - <!-- JAL-2988 -->  OSX - Can't save new files via the File or export menus by typing in a name into the Save dialog box.
+  - <!-- JAL-2988 JAL-2968 -->  Jalview now uses patched version of the [VAqua5](https://violetlib.org/vaqua/overview.html) 'look and feel' which has improved compatibility with the latest version of OSX.