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JAL-2154 test for CDS->protein map
author
Jim Procter
<jprocter@issues.jalview.org>
Thu, 4 Aug 2016 19:54:57 +0000
(20:54 +0100)
committer
Jim Procter
<jprocter@issues.jalview.org>
Thu, 4 Aug 2016 19:54:57 +0000
(20:54 +0100)
src/jalview/util/MapList.java
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diff --git
a/src/jalview/util/MapList.java
b/src/jalview/util/MapList.java
index
cae968e
..
dc5bee8
100644
(file)
--- a/
src/jalview/util/MapList.java
+++ b/
src/jalview/util/MapList.java
@@
-1103,4
+1103,14
@@
public class MapList
return forwardStrand;
}
+ /**
+ *
+ * @return true if from, or to is a three to 1 mapping
+ */
+ public boolean isTripletMap()
+ {
+ return (toRatio == 3 && fromRatio == 1)
+ || (fromRatio == 3 && toRatio == 1);
+ }
+
}