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Remove consensus annotation if out of memory
author
amwaterhouse
<Andrew Waterhouse>
Fri, 27 Oct 2006 17:01:37 +0000
(17:01 +0000)
committer
amwaterhouse
<Andrew Waterhouse>
Fri, 27 Oct 2006 17:01:37 +0000
(17:01 +0000)
src/jalview/gui/AlignViewport.java
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diff --git
a/src/jalview/gui/AlignViewport.java
b/src/jalview/gui/AlignViewport.java
index
36f69a5
..
0519569
100755
(executable)
--- a/
src/jalview/gui/AlignViewport.java
+++ b/
src/jalview/gui/AlignViewport.java
@@
-497,6
+497,8
@@
public class AlignViewport
}
catch (OutOfMemoryError error)
{
+ alignment.deleteAnnotation(consensus);
+
consensus = null;
hconsensus = null;
javax.swing.SwingUtilities.invokeLater(new Runnable()
@@
-543,6
+545,7
@@
public class AlignViewport
seqs.append(consensus.annotations[i].displayCharacter);
}
}
+
SequenceI sq = new Sequence("Consensus", seqs.toString());
sq.setDescription("Percentage Identity Consensus "+((ignoreGapsInConsensusCalculation) ? " without gaps" : ""));
return sq;